Desulfomonile tiedjei: Desti_0794
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Entry
Desti_0794 CDS
T02147
Name
(GenBank) CRISPR-associated helicase Cas3/CRISPR-associated endonuclease Cas3-HD
Organism
dti
Desulfomonile tiedjei
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
ResIII
HD
AAA_22
Helicase_C
Cas3_HD
PhoH
AAA_16
HDOD
Motif
Other DBs
NCBI-ProteinID:
AFM23518
UniProt:
I4C1S7
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Position
903518..905839
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AA seq
773 aa
AA seq
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MSDVYLAHSANRFNRVDYLREHLKDVAALAQEFASVFGASAEANVVGLLHDIGKYGSLFQ
KRLENPRQEKGIDHWSAGAWIALMKFKQQGIAAALAIQGHHVGLQQLDNDTLRTLNLGEL
QKNHPLELRISEADWEELLTRFHDDSLQLPEPQEIHTSLLENHDLNVAAMLDIRMLFSAL
VDADFLATEAHFQPAVTGERCFRKRGLALNAERDWNILSLFLDDLSAKSDASLVVKRLRA
DLLQACIVEASRPPGLFTLTAPTGTGKTLSMLAFALKHALVHGLRRIVVVVPYLSIIEQT
VSAYRTVFQFAQDGSNTEHYILEHHSLAGTKQVGEDSRGRDDDMEDESRRMRRLLAENWD
APIVVTTNVQFLESLFANRSAACRKLHRLARSVILFDEVQTFSVDKAIPTLAALSRLVER
YDSTVVLSTATQPAFRHLHLAVQKSCKAGWQPKEIVSAELRLFERAKRTTVEWSNHPISW
SDLADRLAQERQLLCIVNLKRHALTVYRELKKKSLEGLFHMSTDMCPAHRTEVLKKINMR
LNEDKSCRLISTQCVEAGVDIDFPTVFRALGPFDAIAQAAGRCNRKGNFGLRTVHVFLPD
DEAYPQDGAYSRAAQVTRMFLNELENSDVDIHSPGMFHEYYCRLYDLLDMESQNRPLKDA
LNLRDFTKVADLYRIIDSDTINVLVPYDHQTFQKLRNEALASGITRHWIAKARPYTIGMF
RPKPDHPLWLYLEAVPLKSRKPSGDWFVYFEARHYSSETGLVVPSELSDCLIA
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgtctaccttgcacactcagccaatcgatttaacagagtcgattatttgcgg
gaacaccttaaagacgtagcagctcttgcccaagaattcgcctctgtgttcggcgcgtca
gccgaagccaatgttgttggcctgcttcacgacatcgggaagtacggcagtctttttcag
aagcgtctggaaaatccacgccaagagaaaggcattgaccattggtcagcaggcgcctgg
attgctctgatgaaatttaagcagcagggcattgctgcagcattggcaattcaaggtcac
catgtgggcttgcaacaactcgataatgacactctgaggacattgaaccttggggaattg
cagaagaaccatcctttggaattgcgaatctccgaggccgattgggaagaactgctcact
agatttcatgacgatagcctgcaactgcctgagccgcaggaaattcacacttccctattg
gagaaccacgatttaaatgtggcagcaatgctggacattcgcatgttattttcggcgctg
gttgatgccgacttcctggcaacagaggcgcattttcaaccggcagtcacgggggaaaga
tgctttcgcaaacgtggccttgctctaaatgcagagagagattggaacattctgtcactc
tttttggacgacctttcagcaaaatcagatgcttctctggtcgtgaaaaggctcagagca
gacttgttgcaggcatgtatcgtggaagcgtctcgccctccagggctatttactctaacg
gctccgactgggactggcaagacactgagcatgctcgcttttgcactgaaacatgcgctt
gtgcacggcctccggagaatcgtcgtggtggtcccgtacttgagtattattgagcagacc
gttagcgcatatcgaacggtctttcaatttgcccaagatggcagcaatacggagcattac
attctggagcaccacagtctggccggaacgaaacaagttggggaagactctcgaggtcgc
gatgatgatatggaggatgagagccgccgtatgcgtcgattgctcgccgagaattgggat
gcgcctattgttgtcactaccaacgtccaattcttggagtctctctttgcaaatcgttct
gccgcttgtcgcaagttgcaccgattggccagaagcgtcatcctcttcgacgaggttcaa
acgttttcagttgacaaagcaatccccacattggcggccctttccagactcgtggaaagg
tacgattccaccgtcgtgttatccacagccacacaacctgctttccgtcatctgcatttg
gctgttcagaaaagttgtaaagcgggatggcagcccaaagaaatagtctccgcggaacta
aggctgtttgagcgcgcgaaaagaaccaccgtcgaatggtctaatcacccaatatcgtgg
agcgatctggcagatcgtttagcacaggaacgtcagttgttatgcatcgtgaatctcaaa
cggcacgcgctgaccgtatatcgagaactcaaaaagaaaagcctggaaggcttgtttcat
atgtccacggatatgtgccctgctcatcgaactgaagtactaaaaaagataaacatgcgt
ctaaacgaagataaatcatgccgtctcatttccacccaatgtgtagaagctggcgtcgac
atagattttcctacagttttcagagcattggggccgtttgatgccattgcgcaggcagcg
ggacgatgcaaccgcaaaggaaacttcgggctccgtacggtgcacgtatttctgcccgac
gacgaagcgtatccccaagatggggcttactcccgggcagctcaggtaacccgaatgttc
ctcaatgaattagagaactcggacgtggacatacactcacccggaatgttccacgagtac
tattgccgattatatgatttgttggacatggaaagccagaataggcctctgaaagatgct
cttaacctgagagatttcacaaaagtggccgacctatatcgaatcatcgacagtgatacc
atcaacgtgttagtcccatatgatcatcaaacctttcagaagcttcggaatgaagcattg
gcaagcggtatcacgaggcactggattgccaaggcgcggccatataccatagggatgttt
cggccaaagcccgatcaccctctctggctatatctggaagctgttccgctaaagagcaga
aagccttctggggattggttcgtctattttgaggctcgtcactacagttcagagacgggg
ttagtcgtcccctctgaattgagcgactgcctgatagcctaa
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