Dietzia timorensis: BJL86_0841
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Entry
BJL86_0841 CDS
T04608
Name
(GenBank) putative DNA repair helicase RAD25-like protein
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
dtm
Dietzia timorensis
Pathway
dtm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dtm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
BJL86_0841
09124 Replication and repair
03420 Nucleotide excision repair
BJL86_0841
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dtm03021
]
BJL86_0841
03400 DNA repair and recombination proteins [BR:
dtm03400
]
BJL86_0841
Enzymes [BR:
dtm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BJL86_0841
Transcription machinery [BR:
dtm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
BJL86_0841
DNA repair and recombination proteins [BR:
dtm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
BJL86_0841
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ANI91635
UniProt:
A0A173LH99
LinkDB
All DBs
Position
complement(912510..914180)
Genome browser
AA seq
556 aa
AA seq
DB search
MSGGPLIVQSDKTVLLEIDHPQSAEARGALAPFAELERAPEHVHTYRITPLALWNARAAG
HDAEQVVDVLVQYARFPVPQPLLVDVAETMARYGRLQLVKNPAHGLVLVSFDKAVLAEIK
RHKKIAPMLGEQIDDDTVIVHGSERGHLKQELLKVGWPAEDLAGYVDGEAHPIDLSTEEE
KWALRDYQEMAAESFWSGGSGVVVLPCGAGKTMVGAAAMAKAKATTLILVTNTVSGRQWK
RELVRRTSLTEDEIGEYSGEKKEIRPVTIATYQVITRKTKGVYRALDLFDSRDWGLVIYD
EVHLLPAPVFRMTADLQSRRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDIEAQGWI
APADCVEVRVTLTENERMIYATAEPDERYKICATAKTKIPVVRKLIEQHAGAPTLVIGAY
LDQLDELGETLDVPVIQGSTPNKEREKLFEQFREGEISCLVVSKVANFSIDLPEASVAIQ
VSGTFGSRQEEAQRLGRLLRPKHDGGQAHFYSVVSRDTLDADYAQHRQRFLTEQGYAYRI
IDADDVLGPELPQIGE
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
gtgagcggcggacccctcatcgtccaatcggacaagaccgtgctgctggagatcgaccat
ccccagtccgcggaggcgcgcggcgcgctcgccccgttcgcggagctcgagcgcgcgccc
gagcacgtgcacacctatcggatcaccccgctcgcgctgtggaacgcgcgcgccgcggga
cacgatgccgagcaggtcgtcgacgtgctcgtgcagtacgcgcgcttccctgtgccgcag
ccgctgctcgtcgatgtcgccgagacgatggcgcgctacgggcgcctgcagttggtgaag
aacccggcgcacggcctcgtgctcgtctccttcgacaaggccgtgctcgccgagatcaaa
cggcacaagaagatcgcgcccatgctcggtgaacagatcgacgacgacacggtcatcgtc
cacggctccgagcgcggccacctcaagcaagagctgctcaaggtcggctggcccgccgag
gatctcgccggctacgtcgacggcgaagcccaccccatcgacctctctacagaagaagag
aagtgggcgctgcgcgactaccaggagatggcggccgagtcgttctggtcgggcggctcc
ggcgtcgtggtcctcccctgcggcgcgggcaagacgatggtcggcgccgccgcgatggcc
aaggccaaggcgaccacgctcatcctcgtcaccaacaccgtctcggggcgccagtggaag
cgcgagctcgtgcgccgcacttcgctcacagaggacgagatcggcgagtactcgggcgag
aagaaagagatccgcccggtcaccatcgccacctaccaggtcatcacccgcaagaccaag
ggcgtctaccgggccctggacctgttcgattcccgcgactggggcctggtcatctacgac
gaggtccacctgcttcccgccccggttttccgtatgacggcggacctccagtcccgccgg
cggctggggctcaccgccactcttgtccgggaggatggccgggagggcgacgtgttctcg
ctcatcgggcccaagcgctacgacgccccgtggaaggacatcgaggcccagggctggatc
gcgccggccgactgcgtggaggtccgggtcacgctcaccgagaacgagcggatgatctac
gcgaccgccgagccggacgagcgctacaagatctgcgcgacggcgaagacgaagatcccg
gtggtccgcaagctcatcgagcagcacgcgggcgccccgacgttggtgatcggcgcgtac
cttgaccagctcgacgaactcggcgagaccctcgacgttcccgtcatccagggctcgacg
cccaataaggagcgcgagaagctgttcgagcagttccgtgagggcgagatctcgtgcctc
gtggtgtcgaaggtcgcgaacttctccatcgacctgcccgaggcgtccgtggccatccag
gtgtcggggacgttcggttcgcggcaggaagaggcccagcgcctcggccgcctgctgcgc
ccgaagcacgacggcgggcaggcgcacttctactcggtggtctcgcgcgacaccctcgac
gccgactacgcccagcaccgccagcgcttcctcaccgaacagggctacgcctaccggatc
atcgacgccgacgacgtgctcggcccggagctgccccagatcggcgagtag
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