Desulfobacula toluolica: TOL2_C14800
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Entry
TOL2_C14800 CDS
T02268
Symbol
recJ
Name
(GenBank) RecJ: single-stranded-DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
dto
Desulfobacula toluolica
Pathway
dto03410
Base excision repair
dto03430
Mismatch repair
dto03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dto00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TOL2_C14800 (recJ)
03430 Mismatch repair
TOL2_C14800 (recJ)
03440 Homologous recombination
TOL2_C14800 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dto03400
]
TOL2_C14800 (recJ)
DNA repair and recombination proteins [BR:
dto03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
TOL2_C14800 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
TOL2_C14800 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
TOL2_C14800 (recJ)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
CCK79643
UniProt:
K0NIM0
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All DBs
Position
complement(1747626..1749335)
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AA seq
569 aa
AA seq
DB search
MDTILKYLEPDQEIVERLTKGLNCHPLLAKMLSARGITNIEDANFFLNPNVKNLTNPFFL
KDMDKAVERIFTAIENKEKILIFGDFDADGVTSTALLSDFFEYCDANVSWYIPHRIKEGY
SLQTDHIQMASDQDIDLIITVDCGVSSHEAVIKANLEDIDVIVTDHHEPGIDLPAALAVV
DPKRKDCRSGLDYLAGVGVAFFLVMALRKFLRDKEFWEDIKEPNLIDYLDLFAIGSIGDM
VPLINENRVLCIAGLKKIKQGTRLGLKSLADICRVDLGKIDSDDISFKLVPRINAAGRIS
HARICVSQLTCTDVVNAEKTASLLDQLNLKRQKIEKEIILTIEHRLLKTPDLLNKKLLFL
WDDHWDPSVLGIAASKLSKKYCCPVILLSSAGEKAIGSGRSINNINIHKALTNSEHLLEK
FGGHAMASGLTVKKSNLQALCQSLNRHMENFYSEKDFHKSKTIDATLDFEDINFNLAKEM
DRLRPFGMANPEPVFMCKDICVASSYLIGNSHRKMVLKSAGSISQHMVEAFHFNISDPDN
LPVYYPKIAFKIKINKFKTHAAQIIIEDL
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggataccatactcaaatatcttgaaccggaccaggaaatagtcgaacgattaaccaaa
ggtctgaactgccacccgcttctggcaaaaatgctttcagccaggggaatcacaaatatt
gaagacgcgaacttctttttaaaccccaatgttaaaaatcttaccaatccttttttttta
aaggatatggacaaagcagtagaacgaatttttactgcaattgaaaacaaagaaaagatt
cttattttcggcgattttgatgcagatggcgtgacctctacagccctgctcagtgatttt
tttgaatattgcgatgccaatgtgtcatggtatatcccgcatcgcatcaaagaaggttac
agccttcagacagatcatattcaaatggcatcggatcaggatattgacctgatcattacg
gttgattgcggtgtcagcagtcacgaagccgtcatcaaagccaatcttgaagatattgat
gtcatcgtaaccgaccatcatgagccggggattgacctgcctgctgccctggcagtcgtt
gatcctaaaagaaaagactgcaggtctggattagactatcttgccggtgtgggggttgcc
ttttttcttgtcatggcacttagaaaattcttacgggacaaagagttctgggaagacatc
aaggaacccaatctcatagactatcttgacctgtttgccattggaagcatcggggacatg
gttccattaatcaatgaaaaccgtgttctttgcattgcaggtctaaaaaaaatcaaacag
ggaacaaggcttggattaaaatctcttgctgatatctgccgggttgatctgggaaaaatt
gattcagatgatatttcatttaaacttgtcccgagaattaatgctgcaggcaggatatct
catgccagaatctgtgtttcacagctgacctgcacagatgttgtcaatgcggagaaaaca
gcatcccttctggatcagttaaatctcaaacggcaaaagatcgaaaaagaaattatcctt
acaatagaacacaggctgttaaaaacaccggacttgctgaataaaaagcttctcttttta
tgggatgaccactgggacccaagtgttctgggaattgccgcatcaaaactgtcaaaaaaa
tactgttgtccggtaattttattgtccagcgcaggtgaaaaagccattggttcaggcagg
agcatcaataatatcaacatccacaaagcactcacaaacagcgaacacctgcttgaaaaa
tttggcggccatgctatggcttcgggccttacggttaaaaaaagcaatttacaggcattg
tgtcaaagcttgaaccggcatatggaaaatttttattctgaaaaagattttcacaaatca
aagaccattgatgccactcttgattttgaagatataaattttaatctggccaaagagatg
gacagattaaggccttttggtatggccaaccctgaaccggtttttatgtgtaaagatatc
tgtgtagcctcttcttatctcattggaaacagccacagaaaaatggttcttaaaagtgca
ggctcaatttctcaacatatggttgaagcttttcattttaacatcagtgatcctgataac
ctgcctgtttattacccgaagattgcctttaagattaaaatcaataaattcaaaacacac
gctgcccagataattatcgaagacctttag
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