Candidatus Desulfovibrio trichonymphae: RSDT_0520
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Entry
RSDT_0520 CDS
T05578
Symbol
trpB
Name
(GenBank) tryptophan synthase subunit beta
KO
K01696
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
dtr
Candidatus Desulfovibrio trichonymphae
Pathway
dtr00260
Glycine, serine and threonine metabolism
dtr00400
Phenylalanine, tyrosine and tryptophan biosynthesis
dtr01100
Metabolic pathways
dtr01110
Biosynthesis of secondary metabolites
dtr01230
Biosynthesis of amino acids
Module
dtr_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
dtr00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RSDT_0520 (trpB)
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
RSDT_0520 (trpB)
Enzymes [BR:
dtr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
RSDT_0520 (trpB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PALP
Motif
Other DBs
NCBI-ProteinID:
BAV92032
UniProt:
A0A1J1E3M4
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All DBs
Position
complement(685228..686418)
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AA seq
396 aa
AA seq
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MKESYFGEFGGCFVPELLMPPLLEVEAAMRDILSTPGFQTELEDLLGNYAGRATPLTYCA
RLSEETDFHLWLKREDLLHTGAHKINNTLGQALLAKRMGKTALVAETGAGQHGVATAAAA
ARLGMDCVIYMGSEDVARQSPNVMRMKLLGAEVHAVRNGTRTLKDAINEALRAWISSQET
THYCFGTAAGPHPFPTLVRRLQSVIGQETRSQLFEKTGRLPDAVVACVGGGSNAIGIFYP
FLEETSVRLIGVEAAGTGETGCFNSAPLNLGSPGVLHGNYTMLLQNNDGQIEPSHSISAG
LDYPGVGPEHAWLHKTGRVHYGMVKDANALAAFHRLCKTEGILPALESSHALAWVLDHPQ
KFAPGSHVVVNLSGRGDKDMEIVSNFPHREEPHEHA
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaaagttattttggtgaattcggcggctgttttgttccggaattgcttatgccc
cctcttttagaggttgaggctgcaatgcgtgatatcctgtcgacacccggctttcaaaca
gaacttgaagatttgttgggcaactacgcaggacgtgcaacacctttgacatattgcgcc
cgtctttcagaagagaccgactttcatctttggctcaaacgtgaagatttactgcacacc
ggggctcataagattaacaatacactgggtcaggcgctgctggcaaaacgcatgggaaaa
acagcccttgtcgcagagacaggcgccggccagcacggcgttgccactgccgccgccgcc
gcacggctgggcatggattgcgttatttatatgggcagcgaagacgttgcgcgacagtcc
cccaatgttatgcgcatgaaactcttgggggctgaggtacacgctgtgcgaaacggcaca
cgcacccttaaggacgccattaatgaagccctgcgggcttggatctcttctcaggaaaca
acccattactgtttcggcaccgcagccggaccacatccttttcctacactcgtgcggcgg
ctgcaaagtgtaatcggccaggagacgcgttcacaattatttgaaaaaacaggtaggctg
ccagatgctgtcgtagcctgcgtcggcggcggctccaacgccattggaatattttatcca
tttctggaggagacgtcagtgcgcctcatcggtgtcgaagcagccggcaccggcgaaaca
ggttgtttcaattccgctccgcttaacctgggttcaccgggggtgctgcacggcaattat
accatgttgctgcaaaacaatgacggtcagatagaaccgtcacactccatttccgccggg
cttgattatccgggcgtcggccctgagcacgcatggctgcacaagacaggtcgcgtgcac
tacgggatggtcaaagacgccaatgctctcgccgcgtttcatcggctctgcaaaacagag
ggcatactgcccgcgctggaatcctcgcacgcgctggcttgggtgctggatcatccgcag
aaatttgcccccgggtcgcatgtcgttgtcaatctgtcaggccgtggcgacaaagacatg
gagattgtcagcaactttccgcacagagaggaaccgcatgaacacgcttga
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