Candidatus Desulfovibrio trichonymphae: RSDT_0878
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Entry
RSDT_0878 CDS
T05578
Symbol
trmD
Name
(GenBank) putative tRNA (guanine37-N1)-methyltransferase
KO
K00554
tRNA (guanine37-N1)-methyltransferase [EC:
2.1.1.228
]
Organism
dtr
Candidatus Desulfovibrio trichonymphae
Brite
KEGG Orthology (KO) [BR:
dtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dtr03016
]
RSDT_0878 (trmD)
Enzymes [BR:
dtr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.228 tRNA (guanine37-N1)-methyltransferase
RSDT_0878 (trmD)
Transfer RNA biogenesis [BR:
dtr03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
RSDT_0878 (trmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_m1G_MT
Methyltrn_RNA_4
Motif
Other DBs
NCBI-ProteinID:
BAV92390
UniProt:
A0A1J1DZ27
LinkDB
All DBs
Position
complement(1176747..1178042)
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AA seq
431 aa
AA seq
DB search
MPRFHLVTLFPEFFDSPLNTALLGQARRTGLVEFSFHNPRDFSANKHRHTDDRPYGGGPG
MVMQAEPLARAIRSIPQPGRMALLTPGGRLFTQKFAGEFAAEEDITLICGRYEGLDARLG
RLFPLTPVCVGDVVLNGGETAALAVIEAVARLIPGFMGEEESATEESFSSGLLEYPHYTR
PEVLENLPVPEILLTGHHARIARWRRDAALAVTLATRPEMLDTAPLTHEDALSLADIPHE
RPGRNLSFCLLYYPVLLDEKKSGASSLTNLDIHDIARISSSYTMGPFYVVTPLADQQLVL
EEILRHWTRGPASVAKPDRAFALAGVRLAASLDGVVAHLRERAGAEPRLVASSASWPVEK
NVPPPLTPKDIRDWCADRPVLLCLGTARGLAREALERCEGVMRPLRFLGYNHLSVRSAAA
IFADRILGDYR
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgctttcatctggtgacgctctttcccgaattttttgattcgccgctcaacacg
gcactgctggggcaggcgcgccggacaggccttgtcgaattcagtttccacaacccgcgc
gacttcagcgcaaacaagcaccgccacacagacgaccggccttacggcggcggccccggt
atggtcatgcaggccgagccgttagcgcgcgccatacgctccataccgcagcctgggcgc
atggcgcttctgacgccgggtggacgcctctttacccagaaattcgctggcgagtttgcc
gctgaagaggatataacactgatttgcggtcgctatgaaggtctggacgcccgtcttggc
cggcttttccccctcactcctgtctgcgtgggcgacgtggtgctcaacggcggcgaaaca
gcggcactggccgttattgaagctgtggcgaggctcattcccggctttatgggcgaagag
gaatctgctacggaagaaagtttctccagtgggctgctggaatacccccactacacccgt
ccggaagtgctggagaatctgcctgtgcctgaaatccttctgacagggcaccatgcgcgc
attgcacgctggcgccgtgacgcggcgctcgcggtcacgttggcgacccgcccggaaatg
cttgacacggcgcccctgactcatgaagacgccctctcactggccgatattccccacgaa
cggccgggccgcaatctttcattctgcctgctgtactatcctgtactgctggatgaaaaa
aaatccggggcatcctctttgacaaatcttgatattcacgatatagctagaatttccagc
agctatacaatggggcctttttatgtagtcacgccgctggcagatcagcagctcgtgctt
gaggaaattttgcggcactggacgcgcggtccggcaagcgttgccaagcccgacagggcg
ttcgcgcttgcgggtgtccgcctggccgcttcgcttgacggagttgtcgcgcatttgcgc
gaacgcgcgggagcagagccgcggcttgttgcgagttccgcaagctggcctgttgaaaaa
aatgtgccgccgccgttgacgccgaaggacatccgcgactggtgcgcagacaggccggtg
ctgctgtgcctcggcacggcgaggggtcttgcgcgtgaagcgcttgagcgttgcgaaggc
gtgatgcggccactgcgttttttaggctataatcatttatcggtgcgtagcgcagcggct
atttttgcggacagaattttgggcgattaccgctga
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