Duncaniella sp. B8: FDZ78_05700
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Entry
FDZ78_05700 CDS
T05963
Symbol
pelA
Name
(GenBank) pectate lyase
Organism
dun
Duncaniella sp. B8
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pec_lyase
Pectinesterase
Sua5_yciO_yrdC
Motif
Other DBs
NCBI-ProteinID:
QCP72097
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Position
complement(1286900..1290280)
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AA seq
1126 aa
AA seq
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MRLFPLVAALALAFSADAAGKKLYDFVVPRDGSFREAIEAANNRADTTARFRIFLMDGDY
VIPTAGKTTGGDGKEYGDPRSWLKTPNVSIIGESREGTVLVNTTPPATWDNGFGPSCPLE
GIGKGDVLIIEYPAHDTYLQDLTMKSGMADHTGRNIVLHDRSDKTIARNICIWGYQDTYV
SNNRDGRFYFDGGVIRGRTDYICGKGDVYYDGVTFQQCGQGGYLAVPSVPRKYGYVMDSC
YIKSETPDVTYYLGRPWGKGTPTAIWINTTVDVSPITKDKRGYNGWADMSGGWPARFAEY
NTCLTSGKALDLSGRRSLYVDREGKDHSNSPVLTEAEARSYTKTAVLDGWNPDAAIAAAP
LPKNVHVKNNQLRWTGSDEALLYAVCRHGKVVAFTTDTVYNIGSDSSADCWSVRAANFMG
GLGEAVAATDGGAKEVGKGSRYSKRMLRISDPDFLRSDEARRIGDQVLLWQRVTGGWPKN
IDMVTPMTQEEKAAVLANKERRYDSTTDNDATTTQMIYLARLYQATGDVRYRAGFRAGVD
YLLSGQYKNGGWPQFWPVQRDYQPHITYNDDAMVNTMVLLRDISLGLEPFGGDLCDRTRK
NKMKKAFDKGVECILATQIVTDGVATVWCQQHDRETLKPAPARAYELPSYCSQESAWIVR
MLMEIPDPDKKVKAAVHAAMAWFDKYKLTGLRYRRVMENGKWNAVLTSDSLAGPIWARYY
DLDHCVPFVCDRDGIPRRSLEDIGSERRNGYAWFGNRPAELYDLYDKWADRYDPQNKVSI
SFRTKGANENGTFTLGVQPKVRESHFDAIVSRGESIQAAIDKAPENGSEPYRILVRKGLY
NQKVIIDRPNIVLVGEQRDSCIIVGAEGQGSVMVSEFRGEKAPRGIISLTEKADDCLISG
LTVINNYGTTVSNTTSHQFAVFGKATRTIIINSNIISDGNDALSLWGKGEDGRGGLYYHS
DLYLRCPGVDFICPRGTCYATRCRFIGDTRAILWHDGRGDINNKFVVTNSEFDALKPTPL
GRYHHDSQFLILNCRMSRNIIDSDIDHAYKRQPELAEGKNLDLCPWGHRVYYYGCVREGG
HSGWLADNISSAEGSPEFHAVTARWTFDGKWDPEKRIRDLWQVVAY
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgagattatttcctttagtggcggctttggctcttgctttcagtgccgatgccgccggg
aagaaactttatgacttcgtggttccgcgcgacggttctttccgcgaggctattgaagcc
gccaataaccgcgctgacaccacagcgcggttccgcatattcctgatggacggtgactat
gtgatcccgacagcaggaaagaccaccggcggtgacggcaaggaatatggcgatccgcgt
tcatggctcaaaacccctaatgtctccattatcggcgagagccgtgaagggacagtgctt
gtcaacaccactcctcctgccacgtgggacaacggattcggtccctcttgcccgcttgag
ggaatcggcaagggcgatgtgctgatcatcgaatatcccgcccatgacacctatcttcag
gatctgaccatgaaaagcggcatggccgaccacacaggccgcaacatcgtgctccatgac
cgctcagacaagaccatagcccgtaatatctgcatctggggctatcaggatacctacgtc
tccaataacagagacggccgcttctactttgacggtggagtcatccgcggccgcactgac
tatatctgcggcaaaggcgatgtctattatgacggagtgactttccagcagtgcggccag
ggaggctatctggccgtgccctctgtgccgcgcaagtatggctatgtgatggacagctgc
tacataaagagcgagacacctgatgtcacatattatctcggacgtccctggggcaaaggc
accccgaccgctatctggatcaacaccacggtcgatgtctcgcccatcaccaaagacaag
cgcggctataacggctgggccgacatgagcggcggctggccggcacgtttcgccgaatac
aatacctgcctcacctccggcaaagccctcgatctttccggacgccgctctctctatgtg
gaccgcgagggaaaggatcactcaaacagcccggtgctgacagaagccgaagcacgctca
tataccaaaaccgcagtgctcgacggctggaatcctgatgccgctatagctgccgcacca
ctgccaaagaatgtgcatgttaaaaacaatcagctcagatggaccggtagtgacgaagct
ctgctctatgccgtgtgtcgtcatggcaaagtagtggcctttacaaccgatacggtctac
aatatcggttctgactcttcggctgactgctggtcagtgagggccgcgaacttcatgggc
ggtctcggagaggctgtcgccgccactgacggtggtgcaaaagaggtcggtaagggatcg
cgctattccaaacgcatgttgcgcatctctgaccctgactttctccgttcagacgaggcc
cggcgcatcggtgatcaggtgctgctctggcagcgtgtgaccggcggatggcccaagaac
atcgacatggtcactccgatgactcaggaggaaaaagccgccgtgcttgccaacaaggag
cgccgctacgattcgaccaccgacaatgacgcgaccacaacccaaatgatctatctcgcc
cgtctctatcaggccactggcgatgtgagataccgcgccggcttccgcgccggagtggat
tatcttctttccggacagtataaaaacgggggttggcctcagttctggcccgtgcagcgt
gactatcagcctcatatcacctacaatgatgatgcgatggtcaacactatggtgctgctg
cgcgatatcagtctcggccttgaacctttcggcggcgatctttgcgatcggacgagaaaa
aacaaaatgaagaaggcctttgataagggagtggaatgtattctcgcaacccaaatcgtc
actgacggagtggcgacagtgtggtgtcagcaacacgaccgcgagactcttaagcctgcg
cctgcccgcgcatatgaactgccgtcatactgctctcaggagagcgcatggattgtcagg
atgctcatggaaatccctgatcctgacaaaaaggttaaagcagcagtgcatgccgctatg
gcctggtttgacaagtataaactgacaggcctgcgctaccgcagggttatggagaacggc
aagtggaatgctgtgctcacctcggattcgcttgccgggcctatatgggcgcgttactac
gatcttgaccactgtgtgccttttgtctgtgaccgtgacgggattccccgccgcagtctt
gaggacataggcagcgagcgccgcaacggctatgcctggttcggcaaccgtccggccgaa
ctctacgatctctatgacaagtgggccgaccgctatgatccgcagaacaaggtcagcata
agcttccggaccaagggtgccaacgagaacggaactttcaccctcggagtgcagcctaaa
gtcagggagtcgcatttcgatgcgatagtcagccgtggcgagagcattcaggcagccatt
gacaaagcgcctgaaaacggctcggagccttacaggattcttgtgcgcaagggcctctac
aatcagaaggtgatcattgaccgcccgaacatagttcttgtaggcgaacagcgtgacagc
tgcatcatagtcggtgccgaaggccagggttcagtgatggtcagtgaattccgtggcgag
aaagctccgcgcggcatcatcagtcttactgaaaaggccgatgactgcctgataagcggc
ctcacggtcatcaataattacggcacgacggtctccaacacaacctctcaccagtttgcc
gtattcggcaaagccacacgcaccataatcataaacagcaacattatttccgacggcaat
gacgcgctttcgctctggggcaagggagaagacggccgaggtggtctctattaccactca
gatctctatctgcgctgtcccggagtggatttcatctgtccgcgtggcacctgctatgcc
acccgctgccgttttatcggcgacacacgcgccattctctggcatgacggacgcggagat
ataaacaacaaattcgttgtgaccaactccgaattcgacgccctgaagccaacgcctctc
ggtcgctatcaccacgattcgcagttcctgatcctcaattgccgtatgtcgcgcaacatc
attgactcagatatcgatcatgcctacaagcggcagccggaacttgccgagggcaagaat
ctcgatctctgcccctggggacaccgtgtctactactacggctgtgtgcgcgaaggcggt
cacagcggctggttggccgacaatatctcgtctgccgaaggttctccggagtttcatgct
gtcactgcccggtggacttttgatggaaagtgggatcctgaaaagcgcatccgcgacctc
tggcaggtggtggcctattga
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