KEGG   Nitratidesulfovibrio vulgaris Miyazaki F: DvMF_0022
Entry
DvMF_0022         CDS       T00816                                 
Name
(GenBank) metal dependent phosphohydrolase
  KO
K03698  3'-5' exoribonuclease [EC:3.1.-.-]
Organism
dvm  Nitratidesulfovibrio vulgaris Miyazaki F
Brite
KEGG Orthology (KO) [BR:dvm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dvm03019]
    DvMF_0022
Messenger RNA biogenesis [BR:dvm03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     DvMF_0022
SSDB
Motif
Pfam: HD tRNA_anti-codon TraI_2 HDOD HD_3
Other DBs
NCBI-ProteinID: ACL06984
UniProt: B8DN40
LinkDB
Position
28080..29165
AA seq 361 aa
MEKRQTIRDIAANDEVSGLFLLGSATLQQSRNGPFWRLELRDATGSMEAKIWSPQSQAYP
DLAAGQIVDVEGRSGTYRDKVEVTIGRLRVLDDVEQAGLDLGLFLPASPRPAQEMLDELI
ALCKAEFTHAPWRKFVLAVLRDEDIAPRLLAAPAAKSVHHAYVGGLVEHMLSVAGLALRI
ADHYPELDRQALLAGALFHDIGKVWELTGGLANDYSDEGRLLGHIHIGLERIEPHLRKSG
LAPELVTHFKHLILSHHGEYEFGSPRRPKTAEAMALHYADNLDAKMAQFRGLFANHEEDA
TGWTPFQPTLGRFLYRPARSPEEPRPARKSSPAHKGGGKAGADGADDAAKAGPQSVQASL
L
NT seq 1086 nt   +upstreamnt  +downstreamnt
atggaaaaaagacaaaccatacgagatatcgccgccaacgacgaggtgagcgggctgttc
ctgctcggttcggccaccctgcaacagtcgcgcaacggccccttctggcggctggaactg
cgcgacgccaccggcagcatggaggccaagatctggagcccccagagccaggcctatccg
gacctggccgccgggcagatcgtggacgtggaaggccgctccggcacctaccgcgacaag
gtggaagtgaccataggccgcctgcgcgtgctggacgatgtcgagcaggccgggttggac
cttggcctgttcctgcccgccagcccgcgccccgcgcaggagatgctggatgaactgatc
gccctgtgcaaggcggagttcacccacgcgccgtggcgcaagttcgtgctggccgtgctg
cgcgacgaggacatcgccccgcgcctgctggccgcgcccgccgccaaatcggtacaccat
gcctacgtgggcggccttgtggagcacatgctgtccgtggccgggctggccctgcgcatc
gccgaccactacccggaactggaccgccaggccctgctggccggggcgctgttccacgac
atcggcaaggtgtgggagctgaccggtggccttgccaacgactattccgacgaaggacgc
ctgctggggcacatccacatcgggctggaacgcatcgagccgcacctgcgcaagtccggc
cttgcgccggaactggtgacccatttcaagcacctgatcctcagccaccatggcgagtac
gaattcggctctccccggcggcccaagacggcggaagccatggccctgcactacgcggac
aacctggacgccaagatggcccagttccgggggctgttcgccaaccacgaagaggatgcc
accggctggacgccgttccagcccacgctggggcgcttcctgtaccgtccggcccgctcg
cccgaggaaccccgcccggcgcgcaagagcagccccgcccacaagggcggcggcaaggca
ggtgccgacggcgcggacgatgccgccaaggccgggcctcagagcgttcaggcatcattg
ctgtag

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