Nitratidesulfovibrio vulgaris Miyazaki F: DvMF_1246
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Entry
DvMF_1246 CDS
T00816
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
dvm
Nitratidesulfovibrio vulgaris Miyazaki F
Pathway
dvm00470
D-Amino acid metabolism
dvm00550
Peptidoglycan biosynthesis
dvm01100
Metabolic pathways
dvm01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
dvm00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DvMF_1246
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DvMF_1246
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
DvMF_1246
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dvm01011
]
DvMF_1246
Enzymes [BR:
dvm01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
DvMF_1246
Peptidoglycan biosynthesis and degradation proteins [BR:
dvm01011
]
Precursor biosynthesis
Amino acid ligase
DvMF_1246
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_N
Dala_Dala_lig_C
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
ACL08196
UniProt:
B8DLD4
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All DBs
Position
1539988..1541214
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AA seq
408 aa
AA seq
DB search
MSNGKIRVAVFFGGRSPEHDVSIVTGLQVIQALDAAQYEPVPVYVDRCGVWRTGEKLLDR
ATYIPARDADGLPAVSLEIAPGKGGMLVEQTSKLFGKPRRIPFDVAIPAFHGPYGEDGDM
QGLFEAVGIPYTGMRVLASAIFMDKAATKQALAGTGIPMLPCAVLRKPVGGLLPPRADIE
AALAGITLPGCLKPAHLGSSIGVAKVDSIEDIEAVLPGLFRNDTVAIVEPYLDGCVEYNI
SVRRDGEGHATSAIERPKRDSELLDFRQKYLSSGGKTGSKTGGMGGTKSAGDSGSAGMLS
LTREINPDLPESLEGRIRDFAVRTYAAFGGTGAPRMDFMYDATRDEVWLNEVNPIPGSFA
FFLWEAAESPIRFTRLLSLMIDEARAMARHTACPEDPTPEAARLFPRR
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacggcaaaatccgcgtcgcggtctttttcggcgggcgttcgcccgagcatgac
gtcagcatcgtcaccggcttgcaggtcatccaggccctggacgccgcgcagtacgaaccc
gtgcccgtctacgtggaccgctgcggcgtctggcgcaccggcgaaaagctgctggaccgc
gccacctacatccccgcccgcgacgccgacggcctgcccgccgtgtcgctggaaatcgcc
cccggcaagggcggcatgctggtggagcagacctccaagctgttcggcaagcccaggcgc
attcccttcgacgtggccatccccgccttccacggcccctacggcgaagacggcgacatg
cagggcctgttcgaggccgtcggcattccctacaccggcatgcgcgtgctggcttccgcc
atcttcatggacaaggcggccaccaagcaggcactggccggcaccggcattcccatgttg
ccctgcgcggtgctgcgcaagcccgtgggaggcctgctgcccccgcgcgccgacatcgag
gccgcgctggcgggcatcaccctgcccggctgcctgaagcccgcgcaccttggcagcagc
atcggcgtggccaaggtggattccatcgaggacatcgaagcggtgctgcccggcctgttc
aggaacgacaccgtggccatcgtggagccgtatctggacggctgcgtggagtacaacatt
tcggtgcggcgcgacggcgaagggcacgccacctcggccatcgagcggcccaagcgcgac
agcgaactgctggactttcgccagaagtacctttcgtcgggcggaaagaccggcagcaag
accggcggaatgggcggcaccaagagcgcgggcgattccggcagcgcgggcatgctttcg
ctgacgcgagagatcaaccccgaccttcccgaaagcctggaaggccgcatccgcgacttt
gccgtgcgcacctacgcggcctttggcggcaccggcgcgccacgcatggacttcatgtac
gacgccacccgcgacgaggtgtggctgaacgaggtgaaccccatccccggttcgttcgcg
ttcttcctgtgggaagcggcggaaagcccgatacgcttcacccggctgctctcgctgatg
atcgacgaggcgcgggccatggcccggcacaccgcctgcccggaggatccgacccccgag
gccgcccggctgttcccccgccgatag
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