Desulfosarcina widdelii: DSCW_12560
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Entry
DSCW_12560 CDS
T06303
Symbol
alaS
Name
(GenBank) alanine--tRNA ligase
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
dwd
Desulfosarcina widdelii
Pathway
dwd00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dwd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
DSCW_12560 (alaS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dwd01007
]
DSCW_12560 (alaS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dwd03016
]
DSCW_12560 (alaS)
Enzymes [BR:
dwd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
DSCW_12560 (alaS)
Amino acid related enzymes [BR:
dwd01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
DSCW_12560 (alaS)
Transfer RNA biogenesis [BR:
dwd03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
DSCW_12560 (alaS)
Prokaryotic type
DSCW_12560 (alaS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2c
DHHA1
tRNA_SAD
Helo_like_N
Motif
Other DBs
NCBI-ProteinID:
BBO73839
UniProt:
A0A5K7Z0T5
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All DBs
Position
complement(1319072..1321696)
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AA seq
874 aa
AA seq
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MTGNEIRQLYLDFFQKHGHRVVRSSSLIPQDDPTLLFTNAGMVQFKRTFLGEEKRDYLRA
TTSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKEKAVDFAWDLLTNGYGLP
AEKLWASVYLDDDEAYDLWHKRIGIPESRMIRLGEEENFWAMGDTGPCGPCSEIHLDRGE
EHGCGRPDCDVACDCDRFLEIWNLVFMQFNRDEAGVMTPLPKPSIDTGLGLERMASVIQG
TKTNFETDLIYPIIQRAEALAEKPYGESETDDVAMKVIADHSRAAAFLIGDGVLPSNEGR
GYVLRRIMRRAIRYGRNLGLNRPFLHETARVVFDIMAPAYPELKEASAFITNVIENEEVR
FSETLDNGLRVLNDALADIRAKGETRVPGDLIFKLYDTFGFPVDIVRDVVRDEGLTLDTK
GFDARMEHQRKQSRSKIAFSGISDAYRQLSAAGEKPEFVGYGTLTCEAQVVLLVQDGNGV
DGADSGSEVEVVTTATPFYGEAGGQVGDRGTITAPDMEMAVTDTIKDPTGIIIHKGRVQS
GRLENGQTVMLTVDGDHRGAVALNHTATHILHAALRNELGDHVKQAGSLVSADRLRFDFT
HFSQIAPDALERIEMFVNDRIRQNVPVDVEEMDMDQAMASGATALFEEKYGDRVRVINLE
TFSRELCGGTHTGRTGNIGLFKIVSEASVASGVRRIEALTGKVALAHVQQTNRIVQQLSQ
MVKDKPDNLVTRVASIQAAMKAAEKETERLKTKMAEMQADEGGQVAEINGVKTVVQLVTV
EKPAALRELADRFKDRIGSGIVVLGCEAGGKALLIVVVTKDLVNRFHAGNMIKTIAGVVG
GGGGGRPDMAQAGGTQPQHLEKALDKARELIQEG
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atgaccggtaacgaaattcgacagctataccttgacttctttcagaaacacgggcaccgg
gtggtccgcagttcatcgttgatcccccaggacgatccgacgcttcttttcaccaatgcc
gggatggttcagttcaaacggacgtttctgggagaagagaaaagggattacctgcgcgcg
accacgtcgcaaaaatgcgtaagggcggggggcaagcataacgatctggagaatgtcggc
tacacggcccgccaccacacctttttcgaaatgcttggcaatttctccttcggtgactat
ttcaaggaaaaggcggtggatttcgcctgggatcttctgaccaacgggtacggtctgcct
gcggaaaagctatgggcatcggtttacctggacgatgacgaagcgtacgatttgtggcac
aagcgcatcgggattcccgaatcgaggatgatccgtctgggagaggaagaaaatttctgg
gccatgggcgacaccggtccctgcggcccgtgcagcgagattcacctcgaccgtggcgaa
gaacacggttgcggccgtccggactgtgatgtggcctgcgactgcgaccggtttctggag
atctggaatctggttttcatgcagttcaaccgggacgaggccggtgtcatgacaccgctg
cctaaaccgagcatcgacacggggctggggttggagcgtatggcctcggtcattcagggg
acaaagaccaatttcgaaaccgatctgatctaccccattattcagcgcgccgaagcgttg
gccgaaaagccctacggcgaaagcgagaccgacgacgtcgccatgaaagtgattgcggat
cacagccgggccgccgcctttctcatcggcgacggcgtcctgccatctaacgaaggccgc
ggctatgtccttcggcggatcatgcgacgggccatccgctacggacgcaacctggggctg
aaccgaccgtttcttcacgagactgcccgggtggtgttcgacatcatggcgccggcctac
ccggaactcaaggaagcctcggcctttattaccaacgtgatcgaaaacgaagaggtacgg
ttttccgaaaccttggacaatgggctgcgggtgctcaacgacgctttggcggacatccgt
gccaaaggcgagacacgggttcccggcgatctgatattcaaactctacgacaccttcggt
tttcccgtggacatcgtccgggacgtggtgcgcgacgaggggctgaccttggatacaaaa
gggttcgatgcgcgcatggagcatcaacgcaagcagtcccgttccaaaatcgccttttcc
ggcatttccgatgcctaccgccagttgagcgcggccggtgaaaagccggaattcgtaggc
tacggcaccctgacctgcgaagcccaggtggtgctgctggtccaggacggcaacggggtg
gacggcgccgattccggaagcgaagtcgaagtggtgactacggccacgcccttttacggc
gaagccgggggccaggtgggtgaccgcggaaccatcacggcgccggacatggaaatggcg
gttacagacacgatcaaggaccccacgggcatcatcatccacaagggccgggtgcaaagc
ggacgcctggaaaacggccagacggtaatgctgaccgtagacggcgaccaccgcggtgcc
gtggccctgaaccataccgccacgcatatcctgcatgcggccctgcgcaacgaattggga
gaccatgtcaagcaggctggctccctggtttcagccgatcggctgcgcttcgattttaca
catttttcacagatcgctccggacgccctggagcgcatcgaaatgttcgtcaatgaccgc
atccggcaaaacgttcccgtcgacgtcgaggagatggacatggatcaggccatggcgtcg
ggggccacggcgctgttcgaggaaaagtacggagaccgtgtgcgggtcatcaacctggaa
acattcagccgggaactgtgcggggggacccacaccggccggaccggcaatatcggattg
tttaaaatcgtttccgaagcttccgtggcctccggcgtgcgccggatcgaagccctcacg
ggaaaagtcgccctggctcacgtccagcaaaccaaccggatcgtgcagcagttgagccag
atggtcaaagacaagcccgacaacctggtcacgcgggtcgcatccatccaggctgcgatg
aaagcggcggaaaaagagaccgaaaggctcaaaaccaagatggccgagatgcaagccgac
gagggtggacaagtggctgagatcaacggcgtcaagaccgttgtccaactggtgacggtg
gaaaaaccggctgcccttcgcgaactggccgatcggttcaaggaccgcatcggatccggg
atcgtggttctgggctgcgaagccggcggcaaggcacttttgatcgttgtggtgaccaaa
gacctcgtcaaccggttccatgccggaaacatgatcaaaaccattgccggagtagtgggc
ggcggcggcggcggacggcccgatatggcccaggccggcgggacgcaaccgcagcacctg
gaaaaggcattggacaaagcccgggagttaattcaggaaggataa
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