Drosophila willistoni: 6640908
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Entry
6640908 CDS
T01067
Name
(RefSeq) TAR DNA-binding protein 43 isoform X2
KO
K23600
TAR DNA-binding protein 43
Organism
dwi
Drosophila willistoni
Pathway
dwi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dwi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
6640908
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dwi03019
]
6640908
Messenger RNA biogenesis [BR:
dwi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
6640908
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TDP43_N
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
6640908
NCBI-ProteinID:
XP_002063804
FlyBase:
FBgn0217867
UniProt:
B4MRQ1
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Position
2L
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AA seq
556 aa
AA seq
DB search
MDFVQVSEEEGDEPIELPAEEDGTLLLSTLQAQFPGSCGLKYRNMDTKAVRGVRSNEGRL
FPPSVDSGWGEYIYFCVFPKENKRKSDDNLENSTAKTKRIETRLRCTDLIVLGLPWKTTE
DSLREYFESFGEVLMAQIKKDVKSGQSKGFGFVRFGSYEAQMRVLSNRHLIDGRWCEVKV
PNSKGMGHQVPCKVFVGRCTEDINSDDLREYFSKFGEVTDVFIPRPFRAFSFVTFLDPDV
AQSLCGEDHIIKGVSVHVSNAAPKAEQNRNHQGQSYNYNTGNSFGMHSYHHPQGNHINSG
RSGHHRGNNQHNAHGGGDNSAIVNSHGNIGSGGYGGMGGNNFGGANSGGGGYNSSGHNSG
GNINRQDGGGGIPYNRPNNFHGMNQPQHNGNVGGSGGWMNRGHLDMPNLQALGINSQGSS
SSNQGQNMNNPLGVGLNLNTLPMNPALVAAALNQWSMLGNQLQNQNQDQQGGNFLSWMAQ
NGGHSNANNLNNCGGGGGGGGGRKGSNNPNNSGSSGMNKVDNSACNDQQNGCAPGNSGWS
NQSSGSQNSVDKSNFL
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggattttgtacaagtatccgaggaggagggtgatgagcccatcgaattgccagccgag
gaggatgggacattacttttgtccactttacaggcccaattccctggctcctgtggcctt
aaatataggaatatggacactaaagcagtgcgtggtgttcgttccaatgagggcaggctt
tttccacccagtgtcgattcgggctggggagagtacatctacttttgcgtatttccaaaa
gagaacaagcgtaagagtgacgataatttggagaactcgacggcgaaaacaaaacgaatt
gaaacacgtttgcgttgcacagacttgattgtccttggcctgccatggaaaacgactgag
gatagcctacgggagtatttcgaaagctttggcgaagtgctcatggcccagattaagaaa
gatgtgaaatcgggtcaatctaaaggatttggattcgtacgattcggttcgtatgaagca
caaatgcgtgttctttccaatcgtcatctcatcgatggccgttggtgtgaagtcaaagta
cccaactcaaaggggatgggccatcaagtgccatgcaaagtgttcgtcggacgttgcacc
gaggatattaattccgatgatcttcgcgaatatttttcaaaattcggtgaagttacagat
gtattcattcctcgaccatttcgggcattcagttttgttacatttctggatccagatgtg
gctcaatcactttgcggcgaggatcatataattaaaggcgtttctgtacatgtgtcaaat
gccgcaccaaaagccgagcagaatcgaaatcatcagggacaaagttacaactataatacg
ggaaatagttttggcatgcattcgtatcatcatccccaggggaatcacatcaattcgggc
cgtagtggacaccacagaggtaataaccaacacaatgctcatggaggtggtgataactcg
gcaatcgttaatagtcacggcaacattggcagtggtggctatggtggtatgggtggcaat
aatttcggtggtgccaattctggcgggggcggctacaatagtagtggtcacaatagtggc
gggaatatcaatcgccaggatggtggcggcggtattccctataataggccaaataatttt
catggcatgaatcaaccgcagcacaacggcaacgttggcggcagtggcggttggatgaac
aggggacatttggatatgcccaatttgcaggcattaggcatcaattcgcaaggatcgagc
tcatcgaatcaaggtcaaaatatgaacaaccccttaggggtcggccttaatttaaacaca
ttgccgatgaacccggctttggtagctgctgccctaaatcagtggagcatgcttggtaat
cagctgcaaaatcaaaaccaggatcagcagggtggcaattttttatcatggatggcccaa
aacggaggtcactccaacgcaaataacttaaacaattgcggtggcggcggcggcggtgga
ggcggtcgcaagggttccaataatccaaacaattcaggctccagtggcatgaacaaagtc
gacaactctgcctgtaatgaccaacagaatggctgtgcacccggcaactctggctggtcg
aatcagagcagtggctcccagaattctgtggacaagtctaattttctttaa
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