Drosophila yakuba: Dyak_GE17292 Help Entry Dyak_GE17292      CDS       T01068                                  Symbol Dyak_RpII215 Name (GenBank) RNA polymerase II 215kD subunit   KO K03006   DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] Organism dya  Drosophila yakuba Pathway dya03020   RNA polymerase dya03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:dya00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     Dyak_GE17292 (Dyak_RpII215)   09124 Replication and repair    03420 Nucleotide excision repair     Dyak_GE17292 (Dyak_RpII215)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:dya03021]     Dyak_GE17292 (Dyak_RpII215)    03400 DNA repair and recombination proteins [BR:dya03400]     Dyak_GE17292 (Dyak_RpII215) Enzymes [BR:dya01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      Dyak_GE17292 (Dyak_RpII215) Transcription machinery [BR:dya03021]  Eukaryotic type   RNA polymerase II system    RNA polymerase II     Core subunits      Dyak_GE17292 (Dyak_RpII215) DNA repair and recombination proteins [BR:dya03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase II complex       Dyak_GE17292 (Dyak_RpII215) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_6 RNA_pol_Rpb1_7 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 DUF3137 Motif Other DBs NCBI-ProteinID:  EDX01960 FlyBase:  FBgn0084295 UniProt:  B4PY98 LinkDB All DBs Position X Genome browser AA seq 1889 aa AA seqDB search MSTTTDSKAPLRQVKRVQFGILSPDEIRRMSVTEGGVQFAETMEGGRPKLGGLMDPRQGV IDRTSRCQTCAGNMTECPGHFGHIDLAKPVFHIGFITKTIKILRCVCFYCSKMLVSPHNP KIKEIVMKSKGQPRKRLAYVYDLCKGKTICEGGEDMDLTKENQQPDPNKKPGHGGCGHYQ PSIRRTGLDLTAEWKHQNEDSQEKKIVVSAERVWEILKHITDEECFILGMDPKYARPDWM IVTVLPVPPLAVRPAVVMFGAAKNQDDLTHKLSDIIKANNELRKNEASGAAAHVIQENIK MLQFHVATLVDNDMPGMPRAMQKSGKPLKAIKARLKGKEGRIRGNLMGKRVDFSARTVIT PDPNLRIDQVGVPRSIAQNLTFPELVTPFNIDRMQELVRRGNSQYPGAKYIVRDNGERID LRFHPKSSDLHLQCGYKVERHLRDDDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLSC TSPYNADFDGDEMNLHVPQSMETRAEVENIHITPRQIITPQANKPVMGIVQDTLTAVRKM TKRDVFITREQVMNLLMFLPTWDGKMPQPCILKPRPLWTGKQIFSLIIPGNVNMIRTHST HPDEEDDGPYKWISPGDTKVMVEHGELIMGILCKKTLGTSAGSLLHICFLELGHDIAGRF YGNIQTVINNWLLLEGHSIGIGDTIADPQTYNEIQQAIKKAKDDVINVIQKAHNMELEPT PGNTLRQTFENKVNRILNDARDKTGGSAKKSLTEYNNLKAMVVSGSKGSNINISQVIACV GQQNVEGKRIPYGFRKRTLPHFIKDDYGPESRGFVENSYLAGLTPSEFYFHAMGGREGLI DTAVKTAETGYIQRRLIKAMESVMVNYDGTVRNSVGQLIQLRYGEDGLCGELVEFQNMPT VKLSNKAFEKRFKFDWSNERYMRKVFTDDVIKEMTDSSEAIQELEAEWDRLVGDRDSLRQ IFPNGDSKVVLPCNLQRMIWNVQKIFHINKRLPTDLSPMRVIKGVKGLLERCVIVTGNDR ISKQANENATLLFQCLIRSTLCTKYVSEEFRLSTEAFEWLIGEIETRFQQAQANPGEMVG ALAAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFLTGGAA RDAEKAKNVLCRLEHTTLRKVTANTAIYYDPDPQRTVISEDQEFVNVYYEMPDFDPTRIS PWLLRIELDRKRMTDKKLTMEQIAEKINVGFGEDLNCIFNDDNADKLVLRIRIMNNEENK FQDEDEAVDKMEDDMFLRCIEANMLSDMTLQGIEAIGKVYMHLPQTDSKKRIVITETGEF KAIGEWLLETDGTSMMKVLSERDVDPIRTSSNDICEIFQVLGIEAVRKSVEKEMNAVLQF YGLYVNYRHLALLCDVMTAKGHLMAITRHGINRQDTGALMRCSFEETVDVLMDAAAHAET DPMRGVSENIIMGQLPKMGTGCFDLLLDAEKCRFGIEIPNTLGSSMLGGAAMFIGGGSTP SMTPPMTPWVNCNTPRYFSPPGHVSAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSS PGPSMSPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYASASPRYA STTPNFNPQSTGYSPSSSGYSPTSPVYSPTPNFQSSPSFAGSGSNIYSPGNAYSPSSSNY SPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASP HYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLY SPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSP MYSPTAPSHYSPTSPAYSPSSPTFEESDD NT seq 5670 nt NT seq  +upstreamnt  +downstreamnt atgagcaccaccacggattcgaaggcgccactgcgccaggtgaagcgcgtacagtttggc attttgtcacctgatgaaattcgtcgaatgtccgtcaccgaaggtggcgtccagttcgcg gagacgatggagggcggacgtccgaagctgggcggattgatggatccgcgccagggcgtc atagacaggacctcgcgctgtcagacgtgcgccggcaacatgaccgagtgccccggacac tttggacacatcgacctggccaaaccagtgttccacatcggcttcatcaccaagacaatc aagattttgcgatgtgtgtgcttctactgctccaaaatgctggtctcaccgcacaatccg aaaatcaaggagatcgtgatgaagtccaagggacagccgcgtaagcgcctggcctacgtc tatgatctttgcaagggtaagacgatttgcgagggcggcgaggacatggatctcaccaag gagaaccagcagccggatccaaacaaaaagcccggccacggcggttgcggtcactaccag ccgtcgatccggcgaacaggactggatctcaccgccgagtggaagcatcagaacgaggat tcgcaggagaagaagattgtggtatcggcggagcgtgtttgggaaattctcaagcatatc accgacgaggagtgctttattctgggcatggaccccaaatatgcgcgtcccgattggatg atcgtgactgtactgcctgttccaccgttggccgtgcgacccgcagttgtgatgttcggt gcagccaagaatcaggacgatttgacgcacaagctgtccgatatcatcaaagcaaacaat gagctgcgtaagaacgaggccagtggagcggcggcgcacgtgatccaggagaacatcaag atgttgcagttccacgtcgcgacgctggtggacaacgatatgcccggcatgcccagggct atgcaaaagtcgggaaaacccctcaaagccatcaaggcgcgtctcaagggtaaggaaggt aggattcgtggcaatttgatgggcaaacgtgtggacttctccgctcgtactgtcatcaca cccgatccaaatctgcgtatcgatcaggtcggtgtaccgcgttccattgcccagaatctg accttccccgagctggtcactccctttaacatcgatcgcatgcaggagcttgtgcgccga ggtaactcacagtacccgggtgccaagtacattgtgcgcgacaatggcgagcgcattgat cttcgctttcatccgaaatcctctgacctacatctgcagtgcggctacaaggtggagcgg catttgcgcgacgacgatctggtgatcttcaaccgacagcccacgctgcacaaaatgagt atgatgggtcacagggtgaaagtgctgccctggtcgacgttccgcatgaacctctcgtgt acatcgccctacaatgccgatttcgacggcgatgagatgaatttgcacgttccgcagtcc atggagacgcgtgccgaggtggagaacattcatatcacacccagacagatcatcacgccg caggcgaacaaacccgtcatgggtatcgtgcaggacactctgactgcggtgcgaaagatg accaagcgcgatgtattcatcacgcgcgagcaggtgatgaatctgctcatgttcttgccc acgtgggacggtaaaatgccacaaccatgcatcctgaaaccgcgtcccctgtggacgggc aaacagatcttctccctgatcatccctggcaacgtgaacatgatacgcacgcattccacg catccggacgaggaggacgatggaccgtacaagtggatctcgcccggtgacaccaaggta atggtggagcacggcgaacttatcatgggcattctctgcaagaagaccctgggtacttca gccggatcgctgctacatatttgtttccttgaacttggtcacgacatcgctggccggttt tacggcaacattcagaccgtgatcaacaattggctgctactcgagggccatagtattggt attggtgataccattgccgatccgcagacctacaacgagatccagcaggccatcaagaag gccaaggacgacgtgataaacgttatccagaaggcccacaacatggagctggagcccacg ccgggtaatactctgcgtcagacattcgagaacaaggtgaaccgtatcctaaacgatgct cgtgacaagactggtggttcggccaagaaatctctcactgagtacaacaatctaaaagct atggtggtgtctggttccaagggttccaacattaatatctcacaggttattgcttgtgtg ggtcagcagaacgtggagggtaagcgaatcccttacggtttccgcaagcgcactcttccc cactttatcaaagacgattacggtcctgagtcccgtggtttcgtggagaattcgtatctt gccggcctgactccctctgagttctatttccacgccatgggtggtcgtgagggtcttatc gatactgctgtaaagacagctgaaaccggttacatccagcgtcgtcttataaaggctatg gagtcggtgatggtaaactacgacggtacagtgcgtaactccgtgggtcaactgattcag ctgcgttacggcgaggacggtctgtgtggcgagctggtagagttccagaatatgcccacg gtgaaactgtcgaacaaggcgtttgaaaagcgcttcaaatttgactggagcaacgagcga tacatgaggaaggtatttacggacgatgtgattaaggagatgaccgacagcagcgaagcc attcaggaactggaggcagagtgggatcgtttggttggcgatcgcgacagtttgagacaa atctttcccaacggcgattccaaggtggtattaccgtgcaacctgcagcgtatgatctgg aatgtacagaagatcttccacatcaacaagcgcctgcccacggatctctcgcctatgcga gtgatcaagggcgtcaagggattactagaacggtgtgttattgtcacgggaaatgatcgt atttccaagcaagccaacgagaacgccacgttgctattccagtgcctaatccgctcgaca ctgtgtacgaaatacgtgtcagaagagttccgtctgtccacggaggcatttgagtggttg atcggagaaatcgagacgcgtttccaacaggcgcaggccaatcccggcgagatggtgggc gccctggctgcccagagtttgggtgagcccgctactcagatgacactgaacaccttccat ttcgctggtgtgtcttcaaagaacgtaacactgggtgtgccgcgtctcaaggagatcatc aacatatctaagaaacccaaagctccgtcgctaaccgttttccttactggcggtgctgcc cgcgatgctgagaaggccaagaacgtattgtgccgcctggagcataccacgctgcgcaag gtaacagccaacacggctatttactacgatccggatccgcagagaacggtgatatccgag gatcaagagttcgtaaatgtctactacgaaatgccggactttgatcccacacgtatttca ccctggttgttacgtattgagttggaccgcaagcggatgacggacaagaagctgaccatg gagcagattgccgagaagatcaacgtgggcttcggggaggatcttaattgcatcttcaat gacgacaacgctgataagctggtgctgcgcattaggatcatgaacaacgaggagaacaag ttccaggacgaagacgaggccgtcgacaagatggaggacgacatgttcctgcgctgcatt gaggccaacatgctgtcggacatgacactgcagggcatcgaagccatcggcaaggtgtac atgcatctgccacagaccgacagcaagaagcgtatcgtgatcactgagaccggagagttc aaggccattggagagtggctgctcgagacggatggcacatcgatgatgaaagtgctgtct gagcgtgacgtggacccaatccgaacatcctccaacgatatctgcgagattttccaggtg ctgggcatcgaggcggtgcgaaagtctgtcgaaaaggagatgaacgccgtgctgcagttc tacggcctgtacgtgaactatcgtcacttggccctgttgtgcgatgtgatgaccgccaag ggtcatctaatggccatcacccgtcacggcatcaacaggcaagatactggtgcccttatg cgttgctccttcgaggagacagtggacgtgctgatggatgccgccgctcacgcagaaacg gatcccatgaggggcgtatctgagaacattattatgggacagctgcccaaaatgggtacc ggctgctttgaccttctgctcgatgcagagaagtgtcgctttggcatcgagattcccaac acgttgggcagcagcatgctgggcggcgccgctatgttcattggcggtggatctacaccg agcatgacgccaccgatgacgccgtgggttaactgcaacactcctcgatacttctctcca cccggccacgtgagtgccatgactcctggcggtcccagtttctcgccctcggctgcgtcg gatgcgtccggaatgtcgcctagctggtcgccggcacatccgggttcatcacccagttca ccgggcccttcgatgtcgccgtacttcccagcctcgccgagtgtttctccctcttattca ccaacaagtccgaactacacggcatcttctcccggtggagcctcgcccaattactcgccc tcaagtccaaactattcgccgacatcgccgctttatgcgtctgcaagtccgcgttacgcc tcgacaacgccaaatttcaatccccagtcgacgggctactcgccatcttcatcgggatat tcgccaacatccccggtatactcgccaacgccgaacttccagtcgagtccgtcgtttgcg ggcagtggtagcaacatttactcgccgggcaatgcgtactcgcccagctcgtccaactac tcaccaaattcaccatcctactcgccgacatcaccatcgtactcgccgtcgagtccttcg tactcgccaacgtcgccttgctattcgcccacatcgccttcgtactcgccaacgagtccg aactacacgccggtgacaccttcatactcgccgacaagtccgaactactcagcgtcgccg cactattctccagcctcgccagcttactcgcagacgggtgtgaagtactcgccgacatcg ccgacgtactcgccgccatcaccgtcgtacgatgggtctccaggatcgccacaatatacg ccaggatcgccgcagtactcgcctgcctcgcctaagtactcgccgacctcaccgctgtac tcacccagctcgccacagcactcaccctccaaccagtacagcccaacaggatcgacatat tcggcgacgagcccacgatactcgccgaacatgtccatctactcgccgagcagcaccaag tactcgcccacctctccaacgtacacgcccacggcccgtaactactctcccacgtcgccg atgtactcgccaacggcgccatcacactatagtcccacgagtccggcctactcgcccagc agtccaacgttcgaggagagcgacgactga

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