Durio zibethinus (durian): 111287055
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Entry
111287055 CDS
T05242
Name
(RefSeq) CCR4-NOT transcription complex subunit 1-like isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
dzi
Durio zibethinus (durian)
Pathway
dzi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111287055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dzi03019
]
111287055
Messenger RNA biogenesis [BR:
dzi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111287055
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
111287055
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
WEF-hand
Pox_J1
Motif
Other DBs
NCBI-GeneID:
111287055
NCBI-ProteinID:
XP_022732981
UniProt:
A0A6P5XYY8
LinkDB
All DBs
Position
Unknown
AA seq
2476 aa
AA seq
DB search
MPYFLLFSRVLFSPKLQVPIPNASPQSLSLSLVFFFQCLTLALSTENPRDPPPLTMLDLS
STVASHVRFLLQSMTEFNADAVFRELCQFIEYGIEGSVLVLQTCLGCLNFHTTDTKNLQS
EQVVASIFRHAMDKPNFYTVFCQSLRNVDISEDFLENFSKVMQLSVSEKIGIGLSLSDSE
NADTRMCGKNFCMAQIEELHSNPAPFDSSEQIQNIVMFLQCCDTLSKNVDSFMQMLSLVQ
AKDVAHFVLTPILSDEFHEANFLRNMKFFNESGEDDFDALLAEMEKEMSMGDIIKELGYG
CTVDAAHCQDILSLCLPLTEMTISRILGMISYTYVGLEDNQTTFSTFSLALGCSTSSDLP
PLNSWNIDVLIKTIKQLAPGTNWIQVIENLDHEGFYIPNEAAFSFFMSVYRHACQEQFPL
HAICGSVWKNIEGQLSFLKYAVSAAPEVFTFAHSLRQLAYMDAVHGHLGNENHAWLCLDL
LDVLCQLAERGHTSFIRSMLEYPLKHCPEVLLLGMAHVNTTYNLLQHDVTSTVFPMIIKN
ALGAGIVLQLWHVNTNLLLRGFVEVHNTEPDSMIRILEICQELKILESVLEMIPFPSGIR
LAVLASRKEAIDFEKWLSSSLNTYKDFFFEECLKFLKEIQFGGSQEFSAKPFHHTTAVLN
LYLEASSTFFKVLKANTGVITSTQLLEEMERLHSTIMDSNPKLQNGGATDSSTSDGYEDD
IEAEANSYFHQMFSGQLTIDAMVKMLARYKESFVRREQLIFECMIANLFEGYRFFPKYPE
RQLKIAAVLFGSVIKQQLVTHLTLGIALRGVLDALRKPADSKMFLFGTKALEQFVDQLIE
WPQYCNHILQISHLRATHSELVAFIEQALARISSGHLESDGINNPSVHHQLSSQVILGNG
ELNSSSLAQSGPQLSSPFQLQRHDSSLDDRNEAPAISSNDVKPLLSSVGQPSAAPLSDSS
SFQKLQSAVSSSSMLSSSPGFVRPSRGVTSTRFGSALNIETLVAAAERRETPIEAPASEI
QDKISFIINNISAANIEAKGKEFTQILKDLYCPWFAQYMVMKRASIEPNFHDLYLKFLDK
VNSKALNKEIIQATYENCKVLLGSELIKSSSEERSLLKNLGSWLGKLTIGQNQVLRAREI
DPKSLIIEAYEKGLMIAVIPFTSKILEPCQSSLVYQPPNPWTMGILALLAEIYSMPNLKM
NLKFDIEVFTFFKYTYEDKVLFKNLSVDMKDITPTSLLKDRKRELEGNPDFSNKDVGAPQ
PQMVAEVKSGIISSLNHVELPLEVATPPNSGGHTHLLSQYTGPLHLSFGALMEDEKLAAL
GMSDQFPSAQGLFQATPSQSPFSVSQLSTPIPNIGTHVIINQKLSALGLHLHFRRVVPIA
MDRAIKEMVAGIVQRSVSIATQTTKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHIT
CKEPLRGSISSQLRNSLQGLNAGSDLLEQAVQLVNNDNLDLGCAVIEQAATDKAIQTIDG
EIANQLALRRKHRDPAFFDPSMYGQGSMGVVPGALRPKAGHLSLSQQRVYEDFVRLPWQN
QSGQSSHSMSVSPSSLSGDTGLTSTVCSTSGQVAPGYTCGPGNLGQLDVASEAIESTSAA
LLSASSVHIGSAADLTQQTTENDPRNASFLSTTSVPELHSVDATDSVKELGSTSQPLSSP
AATEHLGSSTSETSLSTRDALDKYQMVAQKLETLVTSDGREADIQGVISEVPEIILRCIS
RDEAALAVAQKVFKGLYENTSNSLHVSAHLAILAAVRDVCKLAVKELTSWVMYSDEERKF
NKDITVGLIRSELLNLAEYNVLMAKLIDGGRNKAAMEFAMSLLQTLVTDESRVISELHNL
VDALAKVASKPGSPESLQQLIEMVRNPSASMAALSSATVGKEDKARQSRDKKTPGQAPAN
REDNNNIEALEPDPAGFKEQVSMLFSEWYQICEHPAANDEPCNHYIVQLHQNGLLKGDDM
TERFFCIITELSVAHCLSSEVMIPSTLQSPQQVQTISFLAIDIYAKLVLSILKYCPVEQG
SSKLFLMSKLLIVTVRFIQKDAEDKKTSFNPRPYFRLFINWLLDLGSLDPIADGASFQIL
TAFANAFHALQPLKVPAFSFAWLELVSHRSFMLKLLTGNTQKGWPYIQRLLVDLLQFLEP
FLRNAELGVPVHFLYKGTLRVLLVLLHDFPEFLCDYHFTFCDMIPPSCIQMRNIILSAFP
RNMRLPDPSTPNLKIDLLPEIREPPRILSEVASALKAKQMKADVDEYLKTRPQGSSFLTE
LKRRLLLSPSEAASAGTRYSVPLINSLVLYVGMQAIQQLQSRVPHAQSTANTVPMTVFLV
SAALDIFLNLIGDLDTEGRYLFLNAIANQLRYPNNHTHYFSFILLYLFAEANQEIIQEQI
TRVMLERLIVNKPHPWGLLITFIELIKNPRYNFWNRSFIRCAPEIEKLFKTVARSCGDLK
PVNDSMVSGWVSDNAH
NT seq
7431 nt
NT seq
+upstream
nt +downstream
nt
atgccctattttctacttttctcgagagttctcttcagtcccaagcttcaagtccccatc
cccaacgcatcaccccaatctctctcactctctctggttttcttctttcagtgtcttaca
ctggcgctttccaccgaaaaccctcgcgatccaccgcccctgaccatgctcgacctttcc
tcgacagtcgcttctcacgttcgattcctgctccagtccatgacggaattcaacgccgac
gccgttttccgagagctctgccagttcattgaatatggaattgagggaagcgttctggtg
ctgcaaacttgcttgggttgcttgaattttcacacaacagacacgaagaacttgcaatct
gaacaagttgtagcatcaatttttagacatgccatggacaagccaaatttttatactgtc
ttctgtcagtcactaagaaatgtggatatcagtgaggatttcctggagaatttctcaaaa
gtgatgcagttatcggtgtctgaaaaaattggcattggtctttctttgtctgattcagaa
aatgctgacacaagaatgtgtgggaaaaatttttgtatggctcagattgaggaattgcac
tccaatccagccccttttgattcttctgagcaaattcagaatattgttatgttcctccag
tgctgcgacaccctttccaagaatgtagattcctttatgcagatgttatctctagttcaa
gcaaaagatgttgcacattttgttttgactccaatactttctgatgaattccatgaggct
aatttcttaaggaatatgaaattcttcaatgaatctggagaagatgattttgatgctctt
ttagcagaaatggagaaggaaatgagcatgggagatatcattaaggaactaggttatgga
tgcaccgttgatgcggcacactgccaagatattttatctctttgcttaccactgacagag
atgactatatctagaatacttggcatgatttcctacacctatgttgggcttgaagacaac
caaaccacattttcaacatttagcctggccctaggttgtagcacttcatctgatttacct
ccattgaactcctggaacattgatgttcttataaaaactattaagcaacttgctcctggt
acgaactggattcaagttattgaaaacctggatcacgaggggttctacattcctaacgag
gcagcattctcctttttcatgtctgtatatcgacatgcatgtcaggaacaattccctctc
catgccatttgtggatctgtgtggaagaatattgaaggtcagctatcgtttctaaagtat
gctgtatcagcagctccagaagtatttacctttgcccattctttgaggcagctggcctat
atggatgcagtgcatggtcaccttggaaatgaaaatcatgcctggttgtgtcttgacctc
ttagatgtgctgtgtcaactggctgaaaggggtcacactagtttcattcgatcaatgctc
gagtatcccttaaaacactgccctgaagttctgcttcttgggatggcacatgttaataca
acttataatctcctccagcatgatgtgacttccactgtttttccaatgataattaaaaat
gctctgggtgctggtatagtgcttcaactttggcatgtgaacactaaccttctcttgagg
ggatttgtagaagtacacaacactgagccagacagcatgattagaattttggaaatttgt
caagagttaaagattctagaatcagttttggagatgataccttttccttccggcatcaga
ttagctgtccttgcttccaggaaggaggctatagattttgagaagtggttgagtagtagc
ctgaatacgtataaagattttttctttgaggaatgcctaaagttcctgaaggagatacaa
ttcggtggatcgcaagagttttctgccaaaccttttcatcatactactgctgttttaaat
ctttatttggaagctagttctacctttttcaaggtccttaaagctaatactggggtgata
acctctactcagcttcttgaggaaatggaaaggttgcattctacaattatggattctaat
ccaaagctgcaaaatggtggggctactgattcctcaacctctgatggatatgaagatgat
attgaggctgaagcaaactcttactttcatcaaatgttttctggtcagttgaccattgat
gcaatggttaaaatgcttgcacgatacaaggaatcttttgtaagaagggagcaattgata
tttgagtgcatgattgcgaatctgtttgaaggataccgatttttcccgaagtatcccgaa
agacagctcaaaattgctgcagttctatttggctctgttatcaagcagcaacttgtaact
cacctcacccttggaattgccttgcgtggtgttctagatgcattgcgtaaacctgcagat
tcaaaaatgtttttgtttggaaccaaggccttggagcagtttgtggatcaactgattgag
tggccacagtattgcaaccatattttacagatatcacacctacgtgccactcattcggag
cttgttgctttcattgaacaagctcttgccaggatttcatcggggcacttggagtcagat
gggatcaacaatccttctgttcatcaccaactttcctctcaagtgatcctaggaaatggg
gagttaaatagctctagccttgctcagtctgggccacaactttcttctccatttcagctt
caaagacatgatagttctcttgatgaccgtaatgaagcccctgctatatcatccaatgat
gtgaaacctcttctgtcttctgtagggcagccttcagctgctcccttgagtgattcttct
agctttcagaaactgcagagtgcagtcagtagttcgtctatgctgtcttcttcccctggt
tttgttcgtccttctcgaggagttacttctactagatttggctctgctttgaacattgaa
acactagttgccgctgccgagagaagagagacgcccatagaggctcccgcctctgagatt
caggacaagatatcatttataattaataatatttcagctgcaaatattgaagctaaagga
aaagagttcactcaaatattgaaagatctgtactgtccctggtttgcacagtatatggtt
atgaaaagagcaagcattgaaccaaattttcatgatttatatttgaagttccttgataaa
gttaactcaaaggctttgaataaggagattatccaagctacatatgagaactgcaaggtt
ttattgggatcagagcttataaaatcaagctcagaagagcggtcattgctaaaaaatttg
ggtagttggcttgggaagttaacaattggccagaatcaagttttgagggctcgtgaaata
gatcccaaatctctgattatagaggcgtatgagaaggggttaatgattgcagttatccca
tttacttcaaagattcttgagccatgtcaaagcagtctggtgtatcaaccacctaatccc
tggacgatgggcattctggcattactagcagagatttattcaatgccaaacctgaaaatg
aatctcaaatttgacatagaggtttttacgttttttaagtatacatatgaagacaaggtt
ctattcaagaaccttagtgtggatatgaaggacattacaccaacttctcttctcaaagat
cgtaaaagagaactggaggggaatccggatttttctaataaagatgttggagcaccccaa
ccccaaatggttgcagaagttaaatcaggaataatttcgtcacttaatcatgtcgaacta
cctcttgaggttgccactccacctaattctggaggccacacacatttactatctcagtat
actggtcccttgcatctttcttttggtgcattgatggaggatgaaaaactagcagctcta
ggcatgtctgatcagtttccttctgcccaagggctatttcaagccactccatcacagtca
cctttttctgttagtcagctttccacgccaatacctaacattggaactcatgttattatc
aatcagaagctcagcgctctaggcttgcacttgcattttcggagggtggttccaattgca
atggatagagctatcaaagagatggtagctggtattgttcagcgtagtgtttctatagca
actcaaacaacaaaggagcttgttttaaaggattatgctatggaatcagatgagacacgg
atctataatgcagcacacttgatggttgcaagtttggctggaagtctagcgcacataaca
tgcaaggaacctttacgtggctctatatcaagtcagctgaggaattcacttcagggtctg
aatgctgggagtgatcttctagaacaagctgttcagcttgttaataatgataaccttgat
cttggctgcgcagtcattgaacaggcggctactgataaggcaatacaaaccattgatgga
gaaatagctaatcaacttgctttaagaagaaagcatagggatcctgcattttttgatcca
agcatgtatggacaaggttctatgggtgttgtgcctggggctcttcgacctaaagcaggt
cacttgtctctgtctcagcagcgagtttatgaggattttgttcgccttccttggcaaaat
cagtctggccagagctctcattctatgtctgtcagtccttcaagcttatctggtgatact
ggtctaactagcacagtttgttcaacatcagggcaagttgcccctggttacacatgtggc
ccaggaaacttgggacaattggatgttgcttctgaggcaattgaatctacgtcagctgca
cttttgagtgcttcctcagttcatattggctcagcagctgatcttacccagcagactact
gaaaatgatccccgcaatgcttcattcctgtcaacaacttcagtccctgagttacattca
gtggatgccactgattctgtaaaagaattgggatctacgtcacagcctttatcttcacct
gccgccacagagcatcttgggagtagcacctcagagacttcactgagcactagggatgca
ttggataaatatcagatggttgctcagaagttggaaactttggtgaccagtgatggcaga
gaagcggacattcagggagtgatctctgaggtacctgaaatcatactcagatgcataagt
cgggatgaggctgcactggctgtggctcaaaaggttttcaagggcttatatgagaataca
tcgaacagtcttcatgttagtgcccatcttgctattctggctgctgtccgtgatgtttgc
aagcttgctgttaaggagcttactagttgggtgatgtattcagacgaggagcgaaagttc
aacaaagatatcaccgttggccttattcgaagtgaattgctgaaccttgctgagtacaat
gttcttatggcaaaacttattgatgggggaaggaataaagctgcaatggaatttgcaatg
tcgcttcttcaaactttggtcactgatgaatctagagtcatctcagaactccacaatctt
gttgatgcactggcaaaggttgcttctaaacctggatctcctgaatcattgcaacagttg
attgagatggtcagaaatccatctgctagtatggctgctttatccagtgcaactgttgga
aaggaggataaggctaggcaatctagagacaaaaagacacctggtcaagcaccagctaac
agagaagataataataatatagaggctctagaaccagatcctgctggcttcaaggaacag
gtttccatgctgttttcagaatggtaccagatatgtgagcatccagctgcaaatgatgaa
ccttgtaatcattacattgtacaattgcatcaaaatggactgcttaaaggggatgacatg
acagaacgctttttctgcattatcacggaactttctgttgcgcattgcctatcttctgag
gtcatgattcccagcacattgcaatcacctcagcaagtgcagactatttctttccttgct
attgatatttatgcaaaacttgtgctgtcaattcttaagtattgcccagtggaacaggga
tcaagtaaactctttcttatgtccaagcttttgatcgtgactgtgagatttattcaaaaa
gatgcagaggataagaaaacatcttttaatccaagaccatatttcagattattcatcaac
tggctgttagatcttggttccttggaccctattgctgatggtgcaagttttcagattttg
acagcctttgccaatgcatttcatgctctgcagccccttaaagttcctgccttcagcttt
gcatggctagagctggtcagtcacaggagtttcatgctgaaattgctcactgggaatact
cagaagggttggccctatatccaacgcttgctggtggacttgcttcagttcttggagccg
tttttgaggaatgctgagcttggagtgccggttcattttctatataaaggcacactaagg
gtactgctggttctgcttcatgactttcctgagttcctatgtgattatcatttcaccttc
tgtgatatgattcctccgagctgcatacagatgaggaatattatccttagtgcatttcca
cgcaatatgaggctaccagatccatctactccgaacttgaagattgatttgcttccagaa
atcagagaaccccctcgaatcctctccgaagttgcttctgctcttaaagcaaaacagatg
aaggctgatgtagatgagtatctcaagacgaggccacaaggatcatcatttctaactgaa
ctaaaacgaagactgcttctttcaccaagtgaggcagcatctgctggtacgcgttatagt
gtaccattaatcaactcgctagtgctttatgtcggaatgcaggccattcagcaactgcag
tcaagagtacctcatgcacagtcaacagcaaacactgttccaatgaccgtgttcttggtt
agtgctgccttggatatattcctgaatctaataggggacctagataccgagggtcgttat
ctttttcttaatgcaattgctaaccaattgcggtatcccaacaaccatacacattacttc
tccttcatcttactatacttatttgccgaagcaaatcaggaaatcatccaagagcaaatt
acaagagttatgttggaaaggctaattgttaacaaacctcatccatggggtctactcatt
accttcattgagctcataaagaacccaagatacaacttctggaatagatcattcataagg
tgtgcacctgagattgaaaagctcttcaaaactgttgcgagatcatgcggcgacctgaaa
cctgtgaacgacagcatggtttctggttgggtatcggacaacgcacactga
DBGET
integrated database retrieval system
