Durio zibethinus (durian): 111304888
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Entry
111304888 CDS
T05242
Name
(RefSeq) endoribonuclease Dicer homolog 1-like
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
dzi
Durio zibethinus (durian)
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dzi03036
]
111304888
Chromosome and associated proteins [BR:
dzi03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
111304888
microRNA pathway
RISC loading complex
111304888
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
Dicer_dimer
dsrm
PAZ
Helicase_C
DND1_DSRM
DEAD
ResIII
Dicer_dsRBD
Dicer_PBD
SWI2_SNF2
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
111304888
NCBI-ProteinID:
XP_022757644
UniProt:
A0A6P5ZY36
LinkDB
All DBs
Position
Unknown
AA seq
1953 aa
AA seq
DB search
MEDESRVSGSNGSSYWLDACEDISCDLINDFVDFDAPIVQESLDNATNQDFFGGIDHILD
SIKNGGGLPSVGIDNNGSIVNGNGNGIHDSIVGDGWSPNESSGVSMNLAENSVPSPNGVE
KNDLESKGHEKNCDNSNCNLFDYSKENGVHRDDKRSCESGDRGLDSEERCGKRARANGCK
SDRQYSSKGPYYPRHRQSCSARKRVRDWDEIDRRDREHVRRREHYNGSSRRDGRDREPRG
YWERDRSGSNEMVFRLGTWEADRYREGKAANDKSQECNGKMEKQVEQPKEKLLEEQARQY
QLDVLEQAKKKNTIAFLETGAGKTLIAVLLIKSICDDLQKQNRKMLSVFLVPKVPLVYQQ
AEVIRERTGYQVGHYCGEMGQDFWDARRWLREFETKQVLVMTAQILLNILRHSIIKMEAI
NLLILDECHHAVKKHPYSLVMSEFYHTTPKEKRPSVFGMTASPVNLKGVSSQVDCAIKIH
NLESKLDSVVCTIKDRKELEKHVPMPSEAVIEYDKAASLWSLHEQIKQMEVAVEEAAQSS
SRRSKWQFMGARDAGAKEELHQVYGVSERTESDGAANLIQKLRAVNYALGELGQWCAYKV
AQSFLTALQNDERANYQLDVKFQESYLNKVVSLLQCQLSEGAVTDRDMNTAEAENYNTQD
RNNPDEIEEGELPDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLVKILLKYQHTQDFRAI
IFVERVVAALVLPKVFAELPSLSFIRCASLIGHNNSQEMRTGQMQDTIAKFRDGRVTLLV
ATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRN
ARNSEETLRKEAIERTDLSHLKDTSRLISVDMVPGTVYQVESTGAIVSLNSAVGLIHFYC
SQLPSDRYSILRPKFIMKKHEKPGGPTEYSCKLQLPCNAPFEELEGPECSSMRLAQQAVC
LAACKKLHEMGAFTDMLLPDKGSGEEAEKVDQNDEGDPLPGTARHREFYPEGVASIFQGE
WILSGRDGTDDSKILHLYMYSIKCENNGSSKDPFLTNVSDFAVLFGKELDAEVLSMSMDL
FIARAMITKAFLVFRGSIDITESQLASLKSFHVRLMSIVLDVDVNPSTTPWDPAKAYLFV
PVVSDKCVDPVKEVDWDLVDNIITTDAWSNPLQRARPDVYLGTNERTLGGDRREYGFGKL
RHGMAFGHKPHPTYGIRGAVAPFDVVKATGVVPTLDLIEVQEGDLTKGKLIMADGVTQAE
DLVGRIVTAAHSGKRFYVDSIRNDMTAETSFPRKEGYLGPLEYSSYADYYKQKYGVELRC
KQQPLIRGRGVSYCKNLLSPRFEHSEGESEEALDKTYFVFLPPELCFIHPLPGSLVRGAQ
RLPSIMRRVESMLLAIQLKHMIQFSVPSSKILEALTAASCQETFCYERAELLGDAYLKWV
VSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQYALNKGLQSYIQADRFAPSRWAAPGVLP
VFDEDTKDGETSLFDQEQETIDIIPGKEPGDGLEDEDMEDGEIESDSSSYRVLSSKTLAD
VVEALIGIYYVEGGKHAANHLMKWIGIQVEFDPDEMESTVRPSNVPESILKSVNFDAIEG
ALNIKFKNRALLVEAITHASRPSSGISCYQRLEFVGDAVLDHLITKHLFFTYTNLPPGRL
TDLRAAAVNNENFARVAVKHQLHVHLRHGSSALEKQIRDFVKEVQDELSKPGFNSFGLGD
CKAPKVLGDIVESIAGAIFLDSGRDTAVVWRVFQPLLHPMVTPETLPMHPVRELQERCQQ
QAEGLEYKASRSGNLATVEVFVDGVQVGVAQNPQKKMAQKLAARNALAVLKEKETAEAKE
NNEENGKKKNGNQTFTRQTLNDICLRRNWPMPSYRCANEGGPAHAKRFTFAVKVNTTDRG
WTDECIGEPMPSVKKAKDSAAVLLLELLNKCYS
NT seq
5862 nt
NT seq
+upstream
nt +downstream
nt
atggaggatgagagtagggtttctggcagcaatgggtcatcttactggctggatgcttgt
gaggatatatcatgtgacctgattaatgattttgttgatttcgatgctcctatagttcaa
gaatcacttgacaatgctaccaatcaagatttctttggaggaattgatcacattcttgat
agcatcaagaacggtggtggccttccttcagtgggtattgacaataatggctctatcgtc
aatgggaatggaaatggaattcacgattccattgttggagatggatggtctccaaatgag
tcatctggggtttccatgaatttagctgagaactcggttccatcacctaatggtgtcgaa
aagaatgaccttgaaagcaaagggcatgagaagaactgtgataatagtaattgtaattta
tttgattattctaaggagaatggagtacatagagacgacaaaaggtcttgtgagtcaggg
gataggggtttggatagtgaagagaggtgtggcaagagggctcgtgcgaatggttgcaag
agtgataggcagtattctagtaaaggcccttattaccccaggcataggcagagttgttct
gctaggaagagagttcgcgattgggatgaaattgatcggagagatagggagcatgttagg
agacgagaacattataatggtagtagtaggagggatgggagagatagagaaccgaggggt
tattgggagagggatcgatcagggtccaatgagatggtttttaggttgggtacttgggaa
gcagaccggtacagagaaggaaaggcagctaatgacaaaagtcaggaatgcaatggaaag
atggagaagcaagttgagcagcctaaggaaaaacttttggaggagcaagctcgtcaatat
caattggatgttcttgaacaggcaaaaaagaaaaatacaattgcatttcttgaaacaggg
gcagggaagacactcattgctgttctcctcatcaaaagtatttgtgatgatttgcaaaag
caaaacagaaaaatgctctctgtctttttagttcctaaagttccactagtttatcagcaa
gctgaagttattcgtgagcgaactggttaccaagtgggtcattattgtggggagatgggc
caagatttctgggatgctcgaaggtggctgcgtgagtttgaaacaaaacaggttttagtt
atgaccgctcaaattctgcttaatattttgaggcacagcataattaaaatggaagcaatc
aatcttcttattctggatgagtgtcatcatgctgtgaagaaacatccatactcactggtg
atgtctgaattctatcacacgacaccaaaggagaagagaccttctgtatttgggatgact
gcttctcctgttaacttgaagggtgtttcaagtcaagttgattgtgcaataaagattcat
aatctagaaagcaagctggattcagtagtttgtacaataaaagatcgcaaggaacttgag
aaacatgtgccaatgccctcagaagctgtgatagagtatgataaagcagctagtttatgg
tcccttcatgaacaaataaaacaaatggaagtggcagttgaagaagctgcacagtcaagc
tccagaagaagtaaatggcagttcatgggagctagagatgcaggagcaaaggaagagctt
caccaagtttatggtgtatctgaaagaacagaaagtgatggagctgctaatttgatacaa
aagttaagggccgttaattatgcacttggcgaactgggtcaatggtgtgcctacaaggtt
gcacaatcttttcttacagctttacaaaacgatgagagggcaaactaccagcttgatgtc
aagtttcaagaatcttacctaaataaagttgtgtctctcttacaatgccaattatcagag
ggagctgttactgacagagacatgaacactgcagaagcggagaactataatactcaagat
agaaacaatcctgatgagattgaggaaggagagctccctgacagtcatgttgtctctggt
ggagagcatgtggatgtgataattggagctgctgtagcagacggaaaagtgaccccaaaa
gtacagtcattggttaaaatacttctcaagtatcagcacacacaggattttcgtgcaatc
atctttgttgagcgagttgtggctgctttagttcttcctaaggtttttgcagagcttcca
tctctgagtttcatcaggtgtgcaagtttgattgggcacaacaatagtcaggaaatgcgt
actggacaaatgcaggatacaattgctaaattccgagatggtcgtgtgacattgttagtt
gcaactagtgttgctgaggaaggattggatattcgacaatgcaatgttgttattcgtttt
gatcttgcaaaaactgttttggcatacattcagtctaggggtcgtgcaaggaagcctggg
tcagattacatcttgatgattgagagaggaaatttatctcatgctacattcctaaggaat
gcaaggaatagtgaggagactttgcggaaagaagcaattgagagaactgaccttagtcat
ctgaaggatacttcaaggttaatttcggtggatatggtaccaggtacagtgtaccaggtt
gaatcaactggtgctattgtgagcttaaattctgcagttggactcatccatttttactgc
tctcagcttcccagtgacagatattcaatacttcgtcctaagtttattatgaagaagcat
gagaagccaggaggtccaactgaatattcttgcaagcttcaactcccctgtaatgcacca
tttgaagagcttgagggtcccgaatgcagttcaatgcgtcttgcccaacaggctgtatgc
ttggccgcttgcaagaagctccatgagatgggagcatttactgatatgcttttgccagac
aaaggaagtggggaagaagctgagaaggttgaccagaatgatgaaggagacccacttcct
ggaactgctaggcatagagagttctatccagaaggtgtagcaagcatattccagggagaa
tggattttatctggaagagatggcactgatgactccaaaatacttcatttgtacatgtat
agtatcaaatgtgaaaataatggctcttcaaaagatccattcttaactaatgtctcagat
tttgcagtgctttttggcaaagagctggatgcagaggtgttatcgatgtcgatggatcta
tttatcgctcgagccatgattactaaggcatttcttgtcttcaggggatcaatagatatt
actgaaagtcaactggcatcccttaaaagttttcacgtaagattaatgagcattgtactg
gatgtggatgttaatccttccaccactccttgggatcctgccaaggcatatttgtttgtt
cctgtggttagcgataagtgtgtagatcctgtaaaagaagttgactgggatttggttgat
aatataatcacaacagatgcatggagcaatccccttcagagagctaggccagatgtttac
cttggcacaaatgagaggacgcttggtggtgacagaagggagtatggatttgggaaattg
cgtcatggcatggcttttgggcacaaacctcatcctacttatggtatcagaggagctgta
gccccatttgatgttgtgaaagctaccggggtggttcctactctagatttgattgaggta
caagaaggggatttgaccaaaggcaaattgattatggctgatggtgtcacacaggcagaa
gatcttgttggaagaatagtaacagctgctcattcagggaagaggttttatgtagattca
atacgcaatgacatgacagcggagacctccttcccgaggaaagagggctatcttggtccg
ctggagtatagctcatatgctgattattataagcagaagtatggtgttgaattgaggtgc
aaacaacaacctttaataagaggtcgtggtgtttcatattgcaagaatctcttatctcct
cgatttgagcactcagaaggtgaatctgaggaggctcttgacaaaacatactttgtgttt
cttcctcctgagctgtgttttattcatccacttcctggatcacttgttagaggtgcccag
aggttgccctctattatgaggagggtcgagagcatgcttcttgcaattcaacttaagcac
atgatacaattttctgttccttcttcaaagattttggaagctttgactgccgcttcctgt
caggagacattttgttatgaaagggcagagcttctgggggatgcttacttgaaatgggtt
gttagtcgttttttgtttcttaaatatccccagaaacatgaagggcaactgacccggatg
agacaacaaatggtgagtaacatggttttgtatcagtatgcactaaataagggacttcaa
tcatatatccaagcagatcgctttgcaccatctagatgggctgcccctggagtattgcca
gtctttgacgaggataccaaagatggagaaacatccttatttgatcaagaacaggaaact
attgatattataccaggaaaagaacctggtgatgggctcgaagacgaagatatggaagat
ggtgagattgagagtgactcaagttcttacagagtcctctctagcaagaccctagcagac
gttgttgaagctctaatcggaatttattatgttgaaggtggcaagcatgcagctaaccac
ctcatgaaatggattgggattcaggtggagtttgatcctgatgagatggaatctacagtg
aggccatccaatgttccagaaagcatacttaagagtgttaattttgatgccatagaaggt
gcattgaacatcaagtttaaaaatagggccttgttggtagaagctattactcatgcttca
cgcccatcatctggaatttcctgctaccagcgtctggagtttgttggtgatgcggtctta
gatcatcttataacaaaacacttgtttttcacctacaccaatctgcctccaggtcgcttg
actgatttgagagccgctgctgtaaacaatgaaaattttgcacgagttgcagtaaagcac
cagctgcatgtgcaccttcggcatggatcaagcgcccttgaaaaacagattcgggatttt
gtaaaggaagttcaggatgagttatcaaagcctgggttcaactcctttggtttgggagat
tgcaaagctccaaaagttcttggagatattgttgaatccattgctggtgccatttttctt
gacagtggacgagacacagcagttgtctggagggtttttcaacccctgttgcatcctatg
gtcactccagagacattaccaatgcatcctgtgcgggaactacaagagcgatgccagcaa
caagctgaaggcttggaatacaaagccagtcgaagtggcaatttggccactgtggaggtt
ttcgttgatggtgtccaggttggggttgctcagaatccccaaaagaagatggcacagaaa
ctagctgccaggaatgcgcttgctgttttgaaggagaaggaaacagctgaagccaaggag
aataacgaggagaatgggaaaaagaagaatggaaaccagacatttacaagacaaacattg
aatgatatttgcttgcgtagaaattggcctatgccttcctatcggtgtgcgaatgagggg
gggcctgctcatgcaaagagatttacctttgctgtcaaggtgaataccactgacaggggg
tggacagatgaatgcataggtgagccaatgcctagtgttaagaaggccaaggactcagct
gcggtgcttctcttggaactattaaacaaatgttattcatga
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integrated database retrieval system
