Ensifer adhaerens OV14: OV14_c0035
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Entry
OV14_c0035 CDS
T03054
Name
(GenBank) putative ATP-dependent DNA ligase
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
ead
Ensifer adhaerens OV14
Pathway
ead03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ead00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
OV14_c0035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ead03400
]
OV14_c0035
Enzymes [BR:
ead01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
OV14_c0035
DNA repair and recombination proteins [BR:
ead03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
OV14_c0035
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
RNA_ligase
DNA_ligase_OB_2
Motif
Other DBs
NCBI-ProteinID:
AHK46608
UniProt:
A0AA86B028
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All DBs
Position
pOV14c:complement(40591..41637)
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AA seq
348 aa
AA seq
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MTKPPRQKSQPLLRETDAPIRSRPRKPRDPAQPQLPFDTMPDRIEPCLALLKAKPPSGPD
WIYEIKWDGYRVAVHIEPNAVRIITRGGHNWTDRFPAIAGAARKLGVGTAILDGEAVVLD
AEGRSDFGALQRSLGGRGGRQASEDAILYAFDLLYFDGHDLTKMELSGRRHLLEDLIGES
QGVIRVSQEVEADGATLLAAAREHGLEGIIAKNRDSTYRSGRLGDWLKIKCIQSESFVIV
GYEPSTAARGGIGSLLLAAYQGAAFVYVGSVGTGFKEKEAVELRRMLDTLKTKRAAVAVD
KKGAVFVQPTLIAEIEYRAWTDDGKLRHASYKGLREQQDNAAIYKLGG
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagccgccgcgccagaaatcccagccgcttttgcgggagacggacgctccgatc
cgctcgcgaccgcgcaaaccccgcgatccggcgcagccgcaacttcctttcgacacgatg
cccgatcgcatcgagccgtgcctggcgctgctgaaagcaaagccgccgtcgggaccggac
tggatctacgagatcaaatgggacggctatcgcgtcgcggtccatatcgagccgaatgcg
gtgcggatcatcacccgcggagggcataactggacggaccggtttccggcaatcgcaggc
gccgcgcgcaagctcggcgttgggaccgccattctcgatggagaagccgtcgtgctcgat
gccgagggccgctccgactttggggcgctgcagcgctcacttggtgggcgcgggggcaga
caagcctctgaggatgcgatcctctacgcattcgacctcttgtatttcgatggccatgac
ctgacgaagatggaattgtccggacgccgtcacctgctggaagacctgatcggcgaaagc
cagggcgtaatccgcgtctcgcaggaggtagaggcggatggcgcgacacttctggcggcc
gcgcgcgaacacggtctggaaggcatcatcgccaagaaccgcgacagcacctaccgctcg
ggccggctcggcgactggctgaagatcaaatgcatccaaagcgaaagctttgtgattgtc
ggatacgagccgtccactgcggcgcgcggtgggatcggcagccttctgctggcggcctac
cagggtgccgcgttcgtctatgtcggttcggtcggaactggcttcaaagagaaagaggct
gtcgaactccgccgcatgctggacacgctgaagaccaagcgcgctgcggtggccgtcgac
aagaagggggccgtcttcgttcaaccgactttgattgccgagatcgaatatcgcgcctgg
accgacgacggcaagctgcggcatgcctcgtacaagggcctgcgggaacagcaggacaat
gccgcgatctacaagctcggcggatag
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