Eurytemora affinis: 111710144
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Entry
111710144 CDS
T07296
Name
(RefSeq) LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase ddx49
KO
K14777
ATP-dependent RNA helicase DDX47/RRP3 [EC:
5.6.2.7
]
Organism
eaf
Eurytemora affinis
Brite
KEGG Orthology (KO) [BR:
eaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
eaf03009
]
111710144
Enzymes [BR:
eaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111710144
Ribosome biogenesis [BR:
eaf03009
]
Eukaryotic type
90S particles
Helicases
111710144
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
LRR_8
LRR_4
ResIII
LRR_9
Motif
Other DBs
NCBI-GeneID:
111710144
NCBI-ProteinID:
XP_023339958
LinkDB
All DBs
Position
Unknown
AA seq
962 aa
AA seq
DB search
MSSSENESETEMNEMEETEEKLEKLEQDEEGEEMQTLTANNTSKTFTDLGLIDVLVEACT
AVGWKKPSRIQEEAIPVALQGRDVIGLAETGSGKTGAFALPILHALLENPQKLFALILTP
TRELAFQISEQFEALGASIKVQCAVVVGGIDMVSQSIMLAKKPHIVVATPGRLVDHLENT
KGFSLKSLKYLVMDEADRILNLDFEVELTKILRCIPAERRTMLFSATMTKKVAKLQRASL
KDPVKVEVSNKFQTVEKLQQYYLFIPLKHKEMYLVNILNELAGNSFMIFSSTCSGTIKLA
LILRCLGFTAIPLNGQMSQNKRLASLNKFKAKSRSILIATDVASRGLDIPHVDIVINFDI
PTHSKDYIHRVGRTARAGRAGRAVTFVSQYDVELYQRIENLLGKKLPLYPTEEAEVLLLS
ERVMEANRMAKIELKEMEEKRKSGKKRKKTDIDDAEESMGIVNRLGGKKKQQGKPQKKKN
RRRKVENIYFFQIYKMWDEVEVAEKENRRELVLTGKPTQIRIEKTGLDLNIFKLVNLNFL
DISDAGLAVLPPEIGNLTSLLNLVLKGNTLKNLPENLGKLVKLKLLDVSKNELTSLPNIS
GLEQLSTLNLSLNKLQKFPDIGLEKCTKLSSIDLSVNELTDISQLENTSLEHLAELNLSR
NEISGLTGAILTTWPAMKKLDLGDNKLKAVPQQLGELAKLKELCLLNNPLADNRLKKMAA
QKTTKSVLEYIRQNGDKGGEEAGAKEGKGKKGKKSKGGGGGGGGGGGGGGEKVEVEELCE
KMTVLNVAESNPEVSTQIPVRDVRPFIVICFVKNINLTGDNLRKFLNLQTKLHKDVCGNR
TLATIATHDLSAVKGPLKYTALEPTSFKVEPLSGGKPIRASKLVDKLKAEADAFRKEKKR
SNISGVHQYLPMLDRYPLYPCLVDAEDRVISFPPVTNSGVTRISTETKYHILGYLLKLNI
IF
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaagtgagaatgaatctgagactgagatgaacgagatggaggagacggaggag
aagctagagaagctggagcaggatgaggagggagaggaaatgcaaactctcacagcgaac
aatacctctaagacgttcacagaccttggtctaatagatgtcctagttgaagcatgtact
gcagtgggttggaagaaacccagcaggattcaggaggaagctattccagtagctttgcag
ggtcgggatgttataggactggctgaaaccggctctggtaaaactggcgcttttgcgctt
ccaatccttcatgctcttctagaaaatccgcagaaactgtttgcactaatcctaaccccc
acaagagaactggcttttcagatatctgagcagtttgaggcactaggggcaagtatcaag
gttcagtgtgctgttgttgtcggagggatagatatggtgtcccagtcgattatgctggcg
aaaaaacctcatattgtggtggctactcctggtagactcgtggatcacctggagaataca
aaggggttcagtcttaagtccctcaagtacctagttatggatgaggcggatcgtattcta
aatctggatttcgaggtcgagttgacgaaaattcttcgttgtattccggcggagcgacgg
acgatgttgttctccgctacgatgacgaagaaggttgctaagctgcagagagcatctcta
aaggatcctgtcaaggttgaggtctcgaacaaatttcaaactgtcgagaaattacaacaa
tattatcttttcattccgttaaagcacaaggagatgtatttggtcaatatactgaatgag
ctggccgggaactctttcatgattttctcctccacctgcagcggaaccattaaacttgca
cttatactcagatgtctaggtttcaccgctattcctctgaacggccaaatgtcccagaat
aaacgtctagccagcttaaacaaatttaaggcaaagtctcgttccatcctgatagcaact
gatgtagccagccgagggttggatatccctcacgtggatattgtcattaacttcgatatt
ccgacacatagcaaggattatatccacagggtgggaagaactgcacgagctggccgggct
ggtcgggcagttacattcgtctctcaatacgatgtagaactgtaccagagaatcgagaac
ttactaggaaagaagttgcctctgtatcctacggaggaggccgaggttctccttctctct
gagagggttatggaggccaataggatggcgaagattgaacttaaggagatggaggagaag
cgtaagtctggaaagaagcgtaagaagacggatattgatgacgcagaagaaagtatgggt
attgtcaacagactcggggggaagaagaagcagcaagggaagccacagaagaagaagaac
agaagaagaaaagtagaaaatatatattttttccagatttacaaaatgtgggatgaggta
gaagttgcggagaaggagaataggcgtgaattggttttgactggaaaaccaacccagatt
agaattgagaagacgggactggatctcaatatatttaaactagtgaacctaaacttcctt
gatatttctgatgctggtctggcagtgttgcctcctgaaattggaaatcttacaagcctt
ctcaatcttgttcttaaaggaaatacgctgaaaaatttgcccgaaaatctgggaaagttg
gtaaagttaaaacttctagatgtttcaaagaacgagctaacaagtctaccaaatatatcc
ggtttggaacagctgtcaaccctgaacttatctctgaacaaactccagaagtttccggat
atcggactagagaagtgcacaaagctgtcaagtattgacctcagtgtaaacgagttgacc
gatatatcccagttggagaacacttcgctagaacacctagcggagctaaacctaagccgg
aatgagatctccggtttgaccggcgcaatcctaacaacatggccggcaatgaagaaactt
gacctgggagataataagctcaaagcagttccacagcagcttggtgagctggcgaagttg
aaggagctgtgcctcctgaacaaccccctggcagacaacaggttgaagaagatggctgct
cagaagacgaccaagtctgttcttgaatatattcggcagaatggggacaagggtggagag
gaggctggagccaaggagggcaaaggaaagaagggtaagaagagtaaaggaggaggaggt
ggaggtggaggtggtggaggagggggaggagagaaggtggaggttgaagaactctgtgag
aagatgaccgtcctgaacgtagcggagtccaatccagaagttagcacacaaataccagtt
cgtgacgtgagacctttcattgtaatctgctttgtgaagaatattaaccttacaggagat
aaccttagaaagttcttaaacctacaaactaagcttcacaaggatgtttgtgggaatcga
accctggcaacaatagcaacccatgatctatcagcagtgaaaggtcctctaaagtataca
gctctggagcctacttccttcaaggttgaacctctctccgggggaaaacctatcagggca
tctaagttggttgacaaactgaaggcggaagcagatgctttccggaaggagaagaaacga
agcaatatatccggtgttcatcagtatctgccaatgctagaccggtatccactttatcct
tgtcttgttgatgcagaggacagggttatatcatttccccctgtcactaatagtggagtt
accaggatatctactgaaactaaatatcatattctaggatatctactgaaactaaatatc
atattctag
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