Ensifer adhaerens Casida A: FA04_22855
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Entry
FA04_22855 CDS
T04507
Name
(GenBank) DNA ligase D
Organism
eah
Ensifer adhaerens Casida A
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Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
LigD_N
DNA_ligase_A_M
DNA_ligase_A_C
DNA_primase_S
RNA_ligase
DUF5959
Motif
Other DBs
NCBI-ProteinID:
ANK75533
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Position
pCasidaAA:721413..723884
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AA seq
823 aa
AA seq
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MATSKLTTYRAKRDFSRTPEPAGRSGGEGNRFVVHKHHATADHYDLRLQVGDVLKSWAVP
RGPSLNPADKRLAVETEDHPLDYIDFEGVIPEGEYGGGPMIVWDTGVWAPMDDIEKSLRT
GAFKFRLAGEKLNGGWMLTRLKPKPGDDDTRNWLLFKEHDPAADPDVDILTARPESVKSG
RRIEELVEPPKKPAKAAKPAVLKPGSLPGAVKGPKPQRIEPQLASPIPKPPGASPGEQTW
LHEIKFDGYRTMADLSDGSVRLITRSGLDWTKRYGDLPDAFRKLPCREAMIDGEIVALDD
KGISRFSLLQEALSSGTDGKLVFYAFDILHLDGWNLTEVPLEERKGLLAQLLEGQISSRS
AIQFSDHVEGDGRGLYDQAAELGLEGIVSKRASAPYRSGRTQTWTKTKALKSEDFVIAGY
TVSEAAEGLAALALGEWVGGELHYRGKVGTGFDAATAKQLLARLQALRGGETALDGAPKE
ILWVRPVLSARIHYSNRTTDNVLRHAVFKGLRDVELSAPATAPRKRLITDADLATIQVTN
ADRRVFGRSGPTKLDIAVYYALVGDFMLPHILGRPVSLFRCPTGKRADCFFQRHPFTGMP
PSIVGFNATNSEGESKSFLSIEGTKGYLALAQFGVIELHSWGSRRTRLEKPDRVVFDLDP
GEGISWRDVVEAAVHIRGELEAIGLVPFVKTSGGSGIHVVVPVKPKLDWKKTHQATSAIA
TRLAATAPQTFTTTMGKENRVKRIFIDFHRNARSHTAAAPYSLRARTNLPASAPLQWADL
ETIDAPEDLNYSSLPGLLDTFGDPWADIDDFAKDLPLLSETRT
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtcgaaactcacgacctatcgtgcgaagcgggacttttcccggacgccggag
cctgccggaagaagtggcggggagggcaatcgtttcgtcgtgcacaagcaccatgccact
gccgatcactatgatctcagattacaggtcggcgacgtgctgaaaagctgggcggtcccc
agggggccgtcgctcaaccccgccgacaaacggctggctgtcgagaccgaggatcatccg
ctcgactacatcgacttcgagggcgtcatcccggaaggcgaatatggcggtggaccgatg
atcgtctgggacaccggcgtctgggcaccgatggacgatatcgaaaagagcctgagaacc
ggcgcgttcaagttccgtctagccggcgagaagctcaatggcggctggatgctgacgcgg
ctgaagccgaaaccgggagacgacgacacgcgcaactggctgctgttcaaagagcatgat
ccagccgccgatcctgatgtcgacattctgacggcacgcccggagagcgtgaaaagcggg
cggcgcatcgaagagttggtcgagccgccaaagaagccggctaaagcggcgaagccggcc
gtcctcaagcctggttcgctgccgggcgctgtgaaaggtccgaagccgcagcggatcgag
ccgcagctcgccagccctatcccgaaaccgcccggggcctcaccgggagaacagacttgg
ctgcacgaaatcaagttcgatggctaccgcacgatggcggatctctcggatggttccgta
cggctgatcacgcgcagcgggctcgactggacgaaacgctacggcgatctgccagacgca
ttccgaaagttgccttgtcgggaagcgatgatcgatggcgagatcgtcgctctcgacgac
aagggcatcagccgcttctcgctgttgcaggaggctctttcatccgggaccgatggcaag
ctcgtcttctatgccttcgacatcctccatctcgacggctggaatctcaccgaagttccg
ttggaagagcgcaagggtctgctggctcagctgcttgaagggcagatatcgagccgttcc
gccattcagttcagcgatcatgtggaaggtgacgggcgcgggctctacgatcaggcggcc
gagctggggctggaagggatcgtatcaaagcgtgcctccgcaccctaccgcagcggacgc
acccagacctggaccaagaccaaagcgctcaaaagcgaagacttcgtgatcgcaggctac
accgtctccgaggcggccgaggggctggcggcactggcgctcggggagtgggtgggcggc
gagctgcactaccgcggcaaggtcggcaccggcttcgatgcggcgacagccaagcaatta
ctcgcccggctgcaagccttgcgcgggggggagaccgcgctggacggtgcgcccaaggaa
atcctctgggtgcggccggtgctatccgcccgcatccactactccaaccgcacgaccgac
aatgtcttgcggcatgcggtgttcaaggggcttcgcgatgtcgagctttcggccccggcg
acggcgccgcgcaagcggctgatcacggacgccgacctggcgacgatccaggtgaccaac
gccgaccgccgggtgttcggaagatccggaccgaccaaactcgacattgccgtctactat
gcgctcgtcggcgatttcatgctgccgcatatcctcggacgaccggtgtcgcttttccgc
tgcccgacggggaagcgggccgattgcttcttccagcgccatcccttcaccggcatgccg
ccctccatcgtcggcttcaacgcgaccaattccgagggcgagagcaagtccttcctctcg
atcgaaggcacgaagggttatctggcgctcgctcagttcggcgtgatcgagcttcatagc
tggggttcgcggcgcacgcgcttggagaagcccgatcgcgtcgtcttcgatcttgatccc
ggcgaggggatctcgtggcgcgacgtggtcgaggcagcggtccatattcgcggcgagctg
gaagcaatcggcctcgttcctttcgtcaagacgtctggcggcagcggcatccacgtcgtg
gtgccggtcaagccgaagctggactggaagaagacacaccaggcaacgagcgcgatagcg
acgcggttggcggcgaccgcaccccagacctttaccacgaccatgggcaaggaaaaccgc
gtcaagcgcatcttcatcgacttccaccgcaatgcccgcagccatacggcggccgctccc
tattcgctgcgggcacgcaccaatctgccggcttcggccccgcttcagtgggcggatctg
gagactatcgacgctccggaggatttgaactattcttcgctgcctggacttctggatact
ttcggcgatccctgggcggatatcgacgactttgccaaggatctgccgcttctgtccgaa
acgaggacgtaa
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