KEGG   Ensifer adhaerens Casida A: FA04_28305Help
Entry
FA04_28305        CDS       T04507                                 

Definition
(GenBank) ATP-dependent DNA ligase
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
eah  Ensifer adhaerens Casida A
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:eah00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    FA04_28305
Enzymes [BR:eah01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     FA04_28305
DNA repair and recombination proteins [BR:eah03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     FA04_28305
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
LinkDB All DBs
Position
pCasidaAB:174026..176668
Genome map
AA seq 880 aa AA seqDB search
MAADKLSTYKKKRDFKQTKEPSGAAAVKPANRLRFIIQKHDATRLHYDLRLELDGVFKSW
AVTKGPSLDPHDKRLAVEVEDHPLGYGDFEGTIPKGQYGGGTVMLWDRGYWEPEGNKSPE
EALKKGDLKFVLQGKRLNGSFVLVRMRNDRDGGKRTNWLLIKHHDDHSVEENGAAILDEN
MTSVASGRTMEQIASGKGRKPKPFMMASGEVEADAVWDSKQGRAAGKRKERGRTDVAAST
GVDLPDFIAPQLCETVERPPVGKNWLHEIKFDGYRIQMRVADGEVMLKTRKGLDWTAKYP
EIARASSQLPDCIIDGEICALDDNGAPDFAALQAALSEGTTGNLVYFAFDLLFDGGEDLR
PRPLTDRKARLQELLADATDNPRLRFVEHFETGGDAVLRSACKLSLEGIVSKHADAPYQS
GRTDTWAKSKCRAGHEVVIGGYAKTNGKFRSLLAGVNRGEHFVYVGRVGTGYSAKKVETL
LPKLKAVETTKSPFTGIGAPKNEKEVVWVRPELVAEIEFAGWTADGQVRQAAFKGLREDK
PADEVEAEKPASPATTKTPKPAPMVNNVPRRKGAKAEVMGVLISNPDKPLWPDADDGKAV
TKEELARYHEAVGSWLIEHVRGRPCSIIRAPDGIGGEQFFQRHAMPGTSNLLELVKVFGD
KKPYLQVDRVEGLVAVAQIGGIELHPWNCEPGNPEVPGRLVFDLDPGPDVPFAAVVAAAR
EMRDRLDDLGLVSFCKTTGGKGLHVVTPLAVNARTPLSWAQAKGFARDVCQEMARDNPDL
YLIKMTKSLREGRIFLDYLRNDRMATAVAPLSPRARPGATVSMPLTWTQVKSDLDPKRFT
VRTVPALLTKTIAWEDYCDGQRELEQAIKRLGKQRLRHER
NT seq 2643 nt NT seq  +upstreamnt  +downstreamnt
atggcggctgacaagctctcaacctacaagaagaaacgggacttcaagcagacaaaggaa
ccgagcggcgcggccgctgtcaagccggccaatcggcttcgcttcatcatccagaaacac
gacgcgacgcgccttcattacgatcttcgcctcgaactcgacggcgtgttcaagtcctgg
gctgtgacgaaggggccgtcacttgatccgcatgacaagcggctggcggtcgaggtggag
gatcatccgctcggctatggggatttcgagggcaccatcccgaaaggccagtatggcggt
ggcacggtcatgctgtgggaccggggctattgggagccggaaggaaacaagtcgccggag
gaagccctgaagaagggcgatttgaaattcgtgctgcagggtaagcgcctaaatggcagc
ttcgtgctcgtgcggatgcgcaacgaccgcgacggcggtaagcgcaccaattggctgctg
atcaagcatcatgacgatcattccgttgaagagaacggcgctgccatcctagatgagaac
atgacctcggtggcttccggacgaaccatggagcagatcgcaagcggcaaggggcgcaag
cccaagccgttcatgatggcgagcggtgaggtcgaggccgacgcagtctgggatagcaag
caagggcgcgcagccggtaaacgcaaagagaggggtcggacggatgtggcggcgtcgacc
ggggttgacttgcccgacttcattgctccgcaactctgcgaaaccgtggagcgcccgccg
gtcgggaagaactggctgcatgagatcaagttcgatggataccgcatccaaatgcgggtc
gctgacggtgaggtcatgctgaagacccgcaaagggctggactggacggccaaatatccg
gagatagcgagagcttcctcccaactgcccgactgcattatcgacggcgagatctgcgcg
ctcgacgacaatggcgctccggatttcgcggcgcttcaggccgccttgtcggaaggcacc
accggcaacctggtctatttcgcgttcgacctcctgttcgacggcggcgaggatttgcgg
ccgaggccgcttaccgatcgaaaggcgcgtttgcaggagctgctagcagatgcgaccgac
aatcctcgtcttcgcttcgtcgagcatttcgagacgggcggcgatgcggtcctgcgttct
gcgtgcaagctttccctcgagggcattgtctcgaagcatgccgatgcgccctaccagtcc
ggccgtaccgacacctgggcgaaatcgaaatgccgcgccgggcatgaagtggttatcggc
ggatacgccaagacgaatggcaagttccggtcgctacttgccggcgtcaatcgcggtgag
catttcgtttatgtcggccgcgtcggcacaggctacagcgccaagaaggtcgaaacactg
ctgccaaagttgaaggctgtggaaacgacgaagtcgccgttcacggggatcggcgcgccg
aagaacgaaaaggaagtcgtctgggtgagacccgagttggtcgccgagatcgaattcgct
ggctggaccgcagacgggcaagtccgccaggccgccttcaagggcctgcgggaggacaag
ccggccgatgaggtggaggcggaaaagcctgcatcccccgcgacgaccaaaacgcccaag
cccgcgccgatggtgaacaatgtcccgcgccgcaagggcgcgaaggccgaggtcatgggc
gtgctcatctccaatccggacaaaccgttatggccggacgccgacgacggcaaggccgtc
accaaagaagagctggcccggtatcacgaagcggtcggctcttggctgatcgaacatgtc
aggggccggccgtgttcgatcatccgcgcgcctgacggcattggcggcgaacagtttttc
caacgccacgccatgccgggtacgtcaaacctgctggagctggtcaaggtgttcggcgac
aagaagccgtatttgcaagtcgaccgtgtcgaaggcctcgtcgccgtcgcccagatcggc
ggcatcgaactacatccatggaactgcgaaccaggaaatccggaggtgccgggccggctg
gtcttcgacctcgaccccggtccggatgtgccgttcgcggctgtggttgcggccgcccgt
gaaatgcgggaccggcttgatgatctcggacttgtcagcttctgcaagacgactggcggc
aagggactgcatgtggtgacgccgctggccgtgaacgcgcgtacgccgctttcatgggcg
caggcgaagggcttcgcccgtgacgtctgccaggagatggcccgcgataatccagacctt
tatctcatcaagatgacgaaaagcctgcgggaaggccgcatcttcctcgactatctgcgc
aacgaccgcatggcgacggcggtggccccgctgtcgccacgggcgcgtccgggcgccacg
gtgtcgatgccgctaacctggacgcaggtcaaatccgatctcgatccgaagcggttcacc
gtgcggaccgtaccggcgctgctaacgaagacgattgcgtgggaggactattgcgacgga
cagcgcgagctcgaacaggccatcaagcggctcggcaagcaaaggctgcggcatgagcgt
tga

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