Equus asinus (ass): 106848198
Help
Entry
106848198 CDS
T04645
Symbol
UPF3A
Name
(RefSeq) regulator of nonsense transcripts 3A isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
eai
Equus asinus (ass)
Pathway
eai03013
Nucleocytoplasmic transport
eai03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
eai00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106848198 (UPF3A)
03015 mRNA surveillance pathway
106848198 (UPF3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eai03019
]
106848198 (UPF3A)
Messenger RNA biogenesis [BR:
eai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
106848198 (UPF3A)
mRNA cycle factors
P-body specific factors
106848198 (UPF3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
106848198
NCBI-ProteinID:
XP_044635569
LinkDB
All DBs
Position
11:complement(54184..120314)
Genome browser
AA seq
488 aa
AA seq
DB search
MCHGIKKDCLRKRPALRGKQVQPCRALLKSPGLQTLRGPAVCTRPAAAFPGTADLGSVTR
SWLEVVIRRLPPSLTKEQLEEQLHPLPAHDYFEFFTADLSLFPHLYSRAYINFRNPEDIL
LFRDRFDGYIFIDSKGLEYPAVVEFAPFQKIAKKKLKKKDAKTGSIEDDAEYKKFLEAYC
VEEEKAAASPETLLGDIEAKTRELIARRTTPLLEYIKNRKLEKQRIREEKREERRRRELE
KKRLREEEKRKRREEERCKRKEADKQERAAEREVRIKLLKKPEKGDESTTEKPKERGEEV
DVGDGRQEPCPSCAVVRPRPPESLWEEPRDKSQNDSDKEQRDVERRFREKELETQRYHLD
ESRKHRAHYEFEPKWGKGFTPDRGKKGSQDDGVPVEATERPAGEQRSAGGPMPRKERMGN
KDRPSLQLYQPGTRSRARECGGRPSEEGRAGRRGEAEDSAGAGAKRSEEAEIKTEVFKAQ
EYVKMCCI
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgtgtcatggaataaagaaggactgtttgcgcaaacggccagctctccgcgggaaacag
gttcagccctgcagagccttactaaagtcccctgggctccagaccctccgaggtccggct
gtgtgcactcggccggcggcagcgtttcccgggaccgcggacctgggcagcgtgacgcgg
agctggttggaggtggtcatccgccggcttcctcccagcctcacgaaggagcagctggaa
gaacagctgcacccactgcctgcgcacgactactttgagttctttactgccgatctcagt
ctttttcctcatctctactcaagagcatacattaattttagaaatcctgaggacatcctt
ctttttagagatcgttttgatggatatatcttcattgacagtaaaggcctagaatatcct
gcagtggtagagtttgctccattccagaagatcgccaaaaagaagctaaagaagaaagat
gccaaaaccggaagcattgaagacgatgcagaatacaagaagttcttagaagcttactgt
gtggaggaggagaaagccgctgccagtcctgagactcttctgggggacatagaggcaaag
acaagagaacttattgccagaagaaccacgcctcttttggaatatattaagaacaggaag
ttagagaagcagagaattcgagaggagaagcgggaagaacgaaggaggagggagctggaa
aagaaacgcctgcgggaagaagaaaagagaaaaagaagagaggaggaaagatgtaagaga
aaagaggctgacaagcaagagcgagcggcggagagagaagtgaggattaagctgcttaag
aaaccagaaaagggagacgaatcaaccactgagaaaccaaaagaaagaggagaagaagtc
gatgttggagatggaagacaggagccctgtcccagctgtgccgtcgtgaggcccaggccc
ccagagagcttgtgggaggagcccagggacaagtcacaaaatgacagtgataaagagcag
agggatgtggagagaagatttcgagaaaaagaacttgaaacacaaagataccacttggat
gagagcagaaagcacagagctcactatgagtttgagccgaaatgggggaaaggattcacc
ccagacagagggaagaaagggagccaggacgacggggtccctgtggaggccacagagaga
ccagcgggggagcagaggagcgcgggcggccccatgcccaggaaggagcgcatgggaaac
aaggaccggccatccttgcagctctaccagccgggcactcgcagccgagcacgcgaatgt
ggcggaagaccctctgaggagggccgtgccgggaggaggggcgaggccgaggattccgca
ggggctggtgccaagaggagcgaagaggcagaaattaaaacagaagtgtttaaagcacaa
gaatacgtaaagatgtgctgcatttag
DBGET
integrated database retrieval system
