Aromatoleum aromaticum: ebA1401
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Entry
ebA1401 CDS
T00222
Symbol
mutM
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
eba
Aromatoleum aromaticum
Pathway
eba03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
eba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ebA1401 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eba03400
]
ebA1401 (mutM)
Enzymes [BR:
eba01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
ebA1401 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ebA1401 (mutM)
DNA repair and recombination proteins [BR:
eba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ebA1401 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
CAI06883
UniProt:
Q5P728
LinkDB
All DBs
Position
complement(822097..822912)
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AA seq
271 aa
AA seq
DB search
MPELPEVEITCRGIRPLVAGRTLTALEVRNPRLRQPVPADLAQTLVGERLQGVRRRAKYL
LLDFPHGSVLVHLGMSGSLRVVSADEPAGVHDHVDLVFGAEALRLRDPRRFGLVLWHAGD
GLSHPLLAALGREPLERGFTGAWLHEATRGVRLSIKQTLMDAHRVVGVGNIYASESLFRA
RIHPLAPAGAIGPQRLARLVASVRETLLAAIDAGGSTLRDFVGGDGRAGYFQQQYFVYGR
EGLACRVCATPVRRVVIGQRSTFFCPRCQRR
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgccggaattgccggaggtggaaatcacgtgccgcggcattcgcccgctcgtcgccggg
cggaccctgactgcgctcgaagtgcgcaatccgcggttgcgccagccagtgcccgcggat
ctcgcgcagacgctcgtcggcgagcgactgcagggcgtgcggcgccgtgcgaaatacctt
ctgctggattttccgcacggcagcgtcctcgtgcatcttggcatgtccggcagcctcagg
gtggtgtcggccgacgagcccgcgggcgtgcacgatcacgtcgacctggtgttcggtgcc
gaggcgctgcggctgcgcgatccgcgccggttcggcctcgtgctgtggcatgcgggcgac
ggcttgtcccacccgctgctcgcggcgctcgggcgcgagccgctcgagcgcggttttacc
ggcgcctggctgcatgaagcgacgcgtggagtgcggctctcgatcaagcagacgctgatg
gatgcgcaccgtgtcgtcggagtcggcaacatctacgcgtccgagagcctgttccgcgcc
cgcatccatccgctcgcaccggccggcgcgatcgggccgcagcgccttgcgcgccttgtc
gcgtcggtgcgcgaaacgctgctcgcggcgatcgacgccgggggcagcacgttgcgggac
ttcgtcggtggggacgggcgcgccgggtatttccagcagcagtacttcgtgtacgggcgt
gaaggcctggcgtgccgggtatgcgcaacgcccgttcgtcgtgtcgtgatcggccagcgc
tcgacttttttctgcccgcgctgccagcggcgctga
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