Enterobacteriaceae bacterium S05: CUC76_20165
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Entry
CUC76_20165 CDS
T05725
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
ebu
Enterobacteriaceae bacterium S05
Pathway
ebu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ebu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CUC76_20165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ebu03400
]
CUC76_20165
Enzymes [BR:
ebu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CUC76_20165
DNA repair and recombination proteins [BR:
ebu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CUC76_20165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AWB63731
LinkDB
All DBs
Position
4034270..4037806
Genome browser
AA seq
1178 aa
AA seq
DB search
MTDTAESLDPLRLPLRGERLIEASAGTGKTFTIAALYLRLLLGLGGEAAYPRAISVEELL
VVTFTEAATEELRGRIRSNIHELRIACMRGESDNPLYSALLAEIVDKDDAVKTLLLAERQ
MDEAAVFTIHGFCQRMLSLNAFESGMLFEQQLIEDESRLRYQACADFWRRHCYPLTRDIA
AVIHDVWKGPRDLLKSLDRWLQGEAPQLKSPPAADETLAERHQQIIDRIDSLKQQWREQV
GEIEGVLEDSGLDRRKFNRGNQGKWLEKVTAWAQEETLSYQLPDALEKFAQSFLLERTKA
GGEPPLHPLFSAVESLLASSLTLTDLVLARAMVEIRDAVAREKRRRGELGFDDMLSRLDE
ALRGDSGEALASAIRQRFPVAMIDEFQDTDPQQYRIFRRIWRQQPETALLLIGDPKQAIY
AFRGADIFTYMKARGDVAAHYTLDTNWRSSPGMVGSVNRLFSLSDNPFMFREIPFLPVKA
AAKNQGLRFTVDAADVPAMNVWLMSGETVGAGDYQTFMAQLCATQIRDWLSAGQQGRALL
WRGETSRPVQASDITVLVRNRLEAAQVREALQTLGIPSVYLSNRDSVFETLEAQELLWLL
QAVLSPERENTLRSALATSMFGLTARDIENLNQDEQAWDALVEEFSEYRQIWRQRGVMPM
LRALMTARHIAENLLATRGGERRLTDILHISELLQEAASQLESEHALVRWLTQHIAEPDS
NAASQQMRLESDKHLVQIVTIHKSKGLEYPLVWLPFIARFRKQDQAFYHDRETFAAVLDL
GQDEASLELAEAERLAEDLRLLYVALTRAVWHCSLGVAPLSSRKSGNSDFHLSALGRLLQ
AGEAMDAAGLAARLADFCHGDIALQRPGELDLTPWQAPAASIPPLSARELRRRIADDWRV
TSYSGLQQHGFSSGQDLLPRLDIDAVGVGEVVEEPQLTPHQFPRGAAPGTFLHSLFEELD
FTQPVPDGWMAEKLQLSGFDAQWAPVLTDWLGGVLKTRLPGPDIALNQLAARDKQVEMAF
YLPIAQLLTAERLDALIRQYDPLSADTPPLDFRQVRGMLKGFIDLVFRHEGRYYLLDYKS
NWLGEDREAYTRPAMEQAMRAHRYDLQYQLYSLALHRYLRHRLADYDYDRHFGGVIYLFL
RGMDGQEGGQGIFTTRPVRPLIDGLDQLFAGETQEEAS
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaccgctgagtctttggatcccctgcgcttgcccttgaggggcgagcgcctg
atagaagcctctgcgggcaccggaaaaacctttaccatcgccgcgctgtatctgcggctg
ctgctggggctgggcggcgaggcagcctatccccgcgccatcagcgttgaagaactgctg
gtggtgacctttaccgaggcggcgaccgaagagctgcgcgggcgtatccgcagcaacatc
cacgagctgcgcatcgcctgtatgcgcggtgaatccgataacccgctctacagcgcgctg
ctggcggagatcgtcgataaagacgacgccgtaaagacattgctgctggctgaacggcag
atggacgaggcggcggtgttcaccatccacggtttttgccagcggatgctgagccttaac
gccttcgaatcgggcatgctgttcgagcagcagctgatagaggatgaatcccgcctgcgc
tatcaggcctgcgccgacttctggcgccgtcactgttatccgctgacccgcgatatcgcg
gcggtgatccacgatgtctggaaagggccgcgcgatctgctgaagtcccttgaccgctgg
ctgcagggcgaagcgccgcagcttaagtcgccgccagccgccgacgagacgctggccgaa
cgccatcagcaaatcatcgaccgcattgactcgctcaagcagcagtggcgcgagcaggtg
ggcgagatcgaaggcgtgcttgaagattcgggtcttgaccggcggaagttcaatcgcggc
aaccagggcaaatggcttgagaaagtgaccgcctgggcgcaggaagagacgttgagctat
cagttacccgacgcgctggaaaaatttgcccagtcgtttctgcttgagcgtaccaaagcc
ggtggcgaaccgcccttacatcctctgtttagcgccgtagaatcgctgctggcctcgtcg
ctgacgctcaccgatctggtgctggcgagagcgatggtcgagatccgcgatgcggtcgcg
cgcgaaaagcgccgccgcggcgagctggggtttgacgatatgctcagccggcttgacgag
gcgctgcgcggcgacagcggcgaggcgctggctagcgccattcgccagcgttttccggtg
gcgatgatcgacgaatttcaggataccgacccccaacagtaccggattttccgccgtatc
tggcgccagcagccggagacggcgctgctgctgatcggcgatccgaagcaggccatctac
gcctttcgcggcgccgatatctttacctatatgaaagcgcgcggcgacgttgccgcgcac
tatacgctagacaccaactggcgctcctcgccgggcatggtgggcagcgtcaaccggctg
ttcagcctcagcgataaccccttcatgtttcgcgagatcccgttcctgccggtgaaggcg
gcggcgaagaaccaggggctgcgctttaccgttgacgcggcggacgtaccggcgatgaac
gtctggttgatgtccggcgagaccgtgggcgccggcgattatcagacgtttatggcgcag
ctctgcgccacgcagatccgcgactggctgagcgccggccagcaggggcgcgcgctgctg
tggcgtggggaaacctcgcgcccggtgcaggcttcggatattaccgtgctggtgcgcaac
cggctggaggcggcgcaggtgcgtgaagcgctgcagacgctgggcatcccttcggtctac
ctctccaaccgcgacagcgtttttgagacgctggaggcccaggagctgctctggctgctg
caggcggtgttgtccccggagcgggaaaataccctgcgcagcgcgctggcgacctcgatg
tttggcctgaccgcgcgggatattgaaaatctcaatcaggatgagcaggcgtgggacgcg
ctggtggaggagttcagtgaataccgccagatctggcgtcagcgcggggtgatgccgatg
ctgcgggcgctgatgacggcccggcatatcgccgagaacctgctggcgacccggggcggc
gagcggcgcttaaccgacatattgcacatcagcgaactgcttcaggaggcggccagccag
ctggaaagcgagcatgccctggtacgctggctgacgcagcatatcgccgagccggacagc
aacgctgccagccagcagatgcgtctggaaagcgataagcacctggtgcaaatcgtcact
attcataagtcaaaagggctggaatatcccctggtctggctgccgtttatcgcccggttt
cgcaaacaggaccaggcgttctatcacgatcgcgagacgttcgcggcggtgctggatctg
ggccaggatgaggccagcctcgaactggcggaggcggagcggctggcggaagatctgcgc
ctgctgtacgtcgccttgacccgcgcggtctggcactgcagcctcggcgtagcgcccctc
agcagccgaaagtccggcaacagcgattttcatctaagcgccctggggcggctgctgcag
gcgggcgaagccatggatgccgccgggctggccgcgcgcttagcggacttctgccatggc
gatattgcattgcagaggccgggcgagctggatctgaccccgtggcaggcgccggcggcg
agcatccccccgctgtcggcgcgcgagctgcggcgccgcatcgccgatgactggcgggta
accagctattccggtctgcagcagcatggcttcagcagcgggcaggatctgctgccacgt
ctggatatcgatgccgtcggcgtcggcgaggtggtggaagagccgcagctgaccccgcac
cagttcccgcgcggcgctgcgccggggaccttcctgcacagtctgtttgaggaactggac
tttacccagccggtgccggacggatggatggcggagaaactgcagctgagcgggtttgac
gcacagtgggcgccggtgctgaccgactggctggggggcgtgctgaagacccgcctgccg
gggccggatatcgcgctcaatcagcttgcggcgcgggataaacaggtggaaatggcattt
tacctgcccatcgcgcagctgctgacggcggagcgccttgatgcgcttatccgccagtac
gatcccctttccgccgacacgccgccgctggatttccgccaggtgcgcggcatgctgaag
ggttttatcgatctggtcttccgccacgaaggccgctattacctgctggattacaaatcc
aactggctgggggaagatcgcgaggcctatacccggccggcgatggagcaggcgatgcgg
gcccaccgctacgatctgcagtatcagctgtacagcctggcgctgcaccgctatctgcgc
catcggctggccgattacgactatgaccgccacttcggcggcgtgatttatctcttcctg
cgcggcatggacggtcaggagggggggcaggggatcttcactacccggccggtgcgaccg
ctgattgacggtctggatcagctttttgccggagaaactcaggaggaggcctcatga
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