Pectobacterium atrosepticum SCRI1043: ECA2054
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Entry
ECA2054 CDS
T00186
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase [NADP+]
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
eca
Pectobacterium atrosepticum SCRI1043
Pathway
eca00250
Alanine, aspartate and glutamate metabolism
eca00310
Lysine degradation
eca00350
Tyrosine metabolism
eca00650
Butanoate metabolism
eca00760
Nicotinate and nicotinamide metabolism
eca01100
Metabolic pathways
eca01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
eca00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
ECA2054 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
ECA2054 (gabD)
00310 Lysine degradation
ECA2054 (gabD)
00350 Tyrosine metabolism
ECA2054 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
ECA2054 (gabD)
Enzymes [BR:
eca01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
ECA2054 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
ECA2054 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
ECA2054 (gabD)
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Motif
Pfam:
Aldedh
DUF742
Motif
Other DBs
NCBI-ProteinID:
CAG74956
UniProt:
Q6D5I6
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All DBs
Position
2338271..2339743
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AA seq
490 aa
AA seq
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MQLKQSISLKQQVLFRQHCLIDGEWQDSQSGERLNVTNPATGEVLGTVPLVTVSQTEQAI
AAAEQALVEWRKKTGKERAALLQAWARLIMDNQDDLAVLLTAEQGKPLAEARGEIAYATS
FIDWFAEEAKRIEGSVLQSPQGQQRLMVIKQPIGVCAAITPWNFPAAMITRKVGPALAAG
CTMIVKPAEQTPFTALALAELAQQAGIPRGVLQVIVGDAQSVGKVLCDSPVVRKLSFTGS
TEVGRILMAQSAPTVKKLSLELGGNAPFIVFDDADVDQAVKGILASKFRNSGQTCVCANR
IYVQNGIYPTLVERLIEEVRKLNVGDGTQPGVTQGPLIDDDAVSKVEQHIADALSHGATL
LLGGQRHERGGTFFTPTIVGDVTREMRFAREETFGPVAPLFRFSDEAEVIAMANDTEFGL
AAYVYTRDAIRQWTVPEALDYGMVGINTGLISNEVAPFGGVKQSGLGREGSRFGIEDYLE
MKYLCVDLSR
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgcaactgaaacagtctatttcactgaaacaacaggtgctatttcgtcaacactgcctg
attgatggcgagtggcaggatagccaaagcggtgaacgcctgaatgtcaccaatccggcg
acgggtgaggtgctgggtacggtgccactcgtgacggtgtcacaaaccgagcaggcgatt
gccgccgcagaacaggcgctggttgaatggcgtaagaagacgggaaaagaacgtgccgcg
ctattgcaggcgtgggcacgcctgattatggacaatcaggacgatctggctgtgctgctg
acggcggagcagggaaaaccgctggcggaagcgcggggcgaaattgcctatgccaccagt
tttatcgactggtttgcggaagaagctaaacgcattgaaggcagcgtgctgcaatcgccg
caggggcagcagcgcctgatggtgattaagcagcccatcggcgtgtgtgcagcgattacg
ccgtggaattttccggctgcgatgatcacccgtaaggtcgggcccgcgttggcggcgggc
tgcacgatgatcgttaaacctgcggagcagacgccgtttaccgcgctggcgctggcggaa
ttggcgcagcaggcgggtattccgcgcggcgtattgcaggtgattgtcggcgacgcacag
tccgtcggtaaggtgctgtgcgatagcccagtggtgcgcaagctgagcttcaccggttcc
acggaagtgggccgcatcctgatggcgcagagtgcgccaacggtgaaaaaattgtcgctg
gagctagggggcaacgcgccgtttatcgtgtttgacgatgccgatgtggatcaggcggtg
aaaggcattctggcctccaaattccgtaacagcggacagacctgcgtttgtgctaaccgg
atctatgtgcagaacgggatttacccgacgctggtagaacggctgatcgaggaagtgcgt
aaattaaacgtgggcgacggtacacagccaggtgtcacacaggggccgctgattgatgac
gatgcggtcagcaaagtcgagcagcacattgccgatgcgttatcgcacggggcaacgcta
ctactgggcggccaacgccacgaacgaggcggtacgttcttcacgccgaccatcgttggc
gacgtgacccgcgagatgcgttttgcgcgtgaagagacgttcgggccagtcgcaccgctg
ttccgcttcagcgatgaagccgaggtgattgcgatggcgaacgataccgagttcggtctg
gctgcctatgtctacacgcgcgacgcgatacgccagtggacggtgccggaagcactggac
tacggcatggttggcatcaataccggattgatctcgaatgaagtcgcgccgtttggcggg
gtgaaacagtcagggctgggccgtgaaggctcacgtttcggtatcgaagactatctggaa
atgaaatacctttgcgtcgatctttcccgataa
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