Erigeron canadensis (horseweed): 122582407
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Entry
122582407 CDS
T07610
Name
(RefSeq) DNA mismatch repair protein MSH4
KO
K08740
DNA mismatch repair protein MSH4
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ecad03036
]
122582407
Chromosome and associated proteins [BR:
ecad03036
]
Eukaryotic type
Meiosis-specific proteins
Others
122582407
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Ortholog
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GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
AAA_14
AAA_27
Motif
Other DBs
NCBI-GeneID:
122582407
NCBI-ProteinID:
XP_043610732
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All DBs
Position
9:11259263..11269231
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AA seq
792 aa
AA seq
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MEEETGGDRSSFVIGLIENRAKEVGVAAFDLRSAALHLSEYIETSSSYQNTKTLLHFYDP
IVIIVPPNKLAPDGMVGVSQLVDNFYSSIRKVTMLRGCFDDTRGAVLVKSLAAKEPSALG
LDTYYKQYYLCLAAAAATIKWIEAEKGIIITNHSLSVTFNGSFDHMNIDATSVHNLEVIE
PLHSTLLGTSNKKKSLFQTLKTTRTTGGTRLLRANLLQPLKDIETIKARLDCLDELMTNE
QLFFGLSQALRKFPKETDRVLCHFCFKPKKVSNVVLGIDNPRKSQVLISSIIVLKTALDA
LPFLSKVLKDANSFLLANIYKSVCENDKYASIRKRIGEVIDEDVLHARVPFVARTQQCFA
VKAGIDGFLDIARRSFCDTSEAIHNLANKYREDFKLPNLKIPFNIRHGFYFNIPQKDIQG
KLPSKFIQVMKHGNSIHCSTLDLASLNARNKSAAKECYLRTQLCLEELMDAIREDVSVLT
LLAEILCLLDMIVNSFAHMISSKPVDRYTRPHFTENGPLAIDAGRHPILESVHNDFVPNN
IFLSEASNMVIVMGPNMSGKSTYLQQICLIVILAQIGCYIPARFATIRVVDRVFTRMGTV
DNLESNSSTFMTEMKETAFILQNISERSLIVMDELGRATSSSDGFAIAWSCCERLLALKV
YTIFATHMETLSELATVYPNVKILHFNVEVKNNRLDFKFELKDGLRHVPHYGLLLAGVAG
LPSSVIETARNITSRITEKEVKRKEVNYEQYEGIQMAYRVAQRLICLKYSSQDEDSIRQA
LQHLKECYANEL
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagagaccggaggagatcgatcgagctttgttatcggactaatcgagaatcga
gctaaggaggttggagtggcggcttttgacttgaggtccgctgctcttcacctttctgaa
tatatcgaaactagcagctcttatcaaaacacaaagacgcttcttcatttctatgatcca
atagtcatcatagtccctcctaataagcttgcccccgatggcatggttggcgtttctcaa
ctcgttgataatttctattcttcaattcgaaaggtcactatgcttcgtggctgctttgat
gacactaggggagcagtgctggtaaaaagtttagctgccaaagaaccttcggcacttggt
ttagatacttattacaagcaatattatctctgcttggcagcagctgcagcaactatcaag
tggattgaagcagagaaaggaattatcataacgaatcattcattatcggtgacttttaat
ggatcatttgaccatatgaatattgatgcaactagtgtccacaacttggaagttattgag
ccactgcattctacgcttttgggcacaagcaacaaaaagaaaagtttatttcagactctc
aagacaacgagaactactggagggactagacttcttcgtgccaatctgttgcaaccttta
aaagatatagaaactatcaaagctcgacttgactgcctggatgaattaatgaccaatgag
cagctgttttttgggctgtcacaggctcttcggaagtttccaaaagaaactgatagggtc
ctctgtcacttctgcttcaagccaaagaaagttagtaatgtagtattgggcatagataat
cctagaaagagccaggttctaatatcaagtattattgttctcaaaacagctctagatgcc
ttgccatttctctctaaggtattgaaagatgcaaacagctttcttcttgcaaatatatac
aaatctgtatgtgagaatgacaaatatgcttctataaggaaaagaattggcgaggtgatt
gacgaagatgtgcttcatgcacgagttccttttgttgcccggacacagcaatgttttgct
gtcaaggccggaatagatggatttctggatattgcacgaagatcattctgtgataccagt
gaagctatacataaccttgcaaataagtatcgcgaagatttcaagctaccaaatttgaaa
atcccatttaacattaggcatgggttttacttcaatattcctcagaaggatatacaagga
aagcttcctagcaagttcattcaggttatgaagcatgggaacagtatacattgctcaact
ctggatcttgcttctttaaatgcaagaaacaagtctgcagccaaagaatgttatttgcgc
acacaactttgcttggaagaactaatggatgcaattcgagaggatgtctctgtgcttacc
ttgctagctgagatcctatgcctattagatatgattgttaattcatttgctcacatgatt
tcatccaagcctgtagatcgatacaccaggcctcatttcacagagaatggaccactggca
attgatgctggaagacatccgatactagaaagtgtccacaatgattttgttcccaacaat
atctttctttcagaggcttcaaacatggtgattgtcatggggcccaacatgagtggaaaa
agcacataccttcaacaaatttgtcttattgtcatccttgctcaaattggttgctacatt
cctgcccgctttgcaaccataagggtggttgatcgtgtgtttacaaggatgggcacagtc
gataatcttgaatcaaattccagtacgttcatgacagagatgaaagagacggcttttatc
ttgcaaaatatctctgaaaggagtctcattgtcatggatgagctgggcagggcaacatct
tcctctgatggttttgctattgcatggagctgttgtgaaagactattagcactcaaagta
tatacaatattcgccacacacatggagaccctgtcagaactagccaccgtatatccgaat
gtaaagattcttcactttaatgttgaagtaaaaaacaaccggttggatttcaagtttgag
ctgaaagatggactgagacatgtaccacattacggccttctattagcaggagtagctggt
ttgccaagttcagttatcgagactgccagaaatatcacttcgaggattacagagaaggaa
gtgaagaggaaagaagtgaattatgagcaatatgaagggattcagatggcttatcgagtg
gctcagcgtcttatatgtttgaaatattcaagtcaagatgaagattccatccgacaagct
cttcaacatttgaaagagtgttatgccaatgaactataa
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