KEGG   Erigeron canadensis (horseweed): 122588793
Entry
122588793         CDS       T07610                                 
Name
(RefSeq) histone deacetylase 19
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
ecad  Erigeron canadensis (horseweed)
Pathway
ecad03082  ATP-dependent chromatin remodeling
ecad03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    122588793
   03083 Polycomb repressive complex
    122588793
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ecad03036]
    122588793
Enzymes [BR:ecad01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     122588793
Chromosome and associated proteins [BR:ecad03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     122588793
   HDAC complexes
    Sin3A-HDAC complex
     122588793
    BRAF-HDAC complex
     122588793
    REST complex
     122588793
    SHIP complex
     122588793
    MiDAC complex
     122588793
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     122588793
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    122588793
  Chromatin remodeling factors
   NuRD complex
    122588793
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 122588793
NCBI-ProteinID: XP_043616932
LinkDB
Position
2:complement(30634501..30639405)
AA seq 495 aa
METGGNSLASGPDGVKRKVYYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMH
VVKPVPARDKDLCRFHADDYVTFLRGITPETQQDQLRQLKRFNVGEDCPVFDGLYSFCQT
YAGGSVGGAVKLNHDYCDIAINWAGGLHHAKKCEASGFCYVNDIVLSILELLKQHQRVLY
VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKYYSLNVPLDDGI
DDESYQSLFKPIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKYMRSFN
VPLLLLGGGGYTIRNVARCWCYETGVALGIELEDKMPQHEYYEYFGPDYTLHVAPSNMEN
KNSRQLLDEIRSKLLDNLSKLQHAPSVQFQERPPDTEFPEPDEDQEDDDRRSDDSDMDEN
NESKPFSGRVKRELHDIESKDMDDLKEGERSSARDMDASFAEISLKGSNSGPAPADVKLE
HGSSNKPDQPSEMNL
NT seq 1488 nt   +upstreamnt  +downstreamnt
atggagactggaggcaattctctagcgtctgggccggatggagtgaagagaaaagtgtat
tacttttacgacccggaagtcgggaactactattatggacaaggtcacccaatgaagcca
cacagaattcgcatgacacatgctctactagctcactatggtttactgcaaaacatgcat
gtggtgaaacctgttcctgctagggataaggatctttgtaggtttcacgctgatgattat
gttacttttctaaggggcatcaccccggaaacacagcaagatcagttaaggcagctaaaa
aggtttaatgttggtgaagactgcccggtgtttgacggtctttactccttctgccaaact
tatgcaggaggttctgttggaggggcagtcaagttgaatcacgattactgtgacattgca
ataaattgggcaggtgggctgcatcatgctaaaaaatgtgaggcttctggtttctgttat
gttaatgatatcgtgctgtctatacttgaacttctgaaacagcaccagcgtgtgctatat
gtagatattgacattcatcatggtgatggtgttgaggaggctttctacactactgacagg
gtgatgacggtttctttccataaattcggagattattttcctggtacaggggatattcga
gatattggatattcaaagggaaaatattattctttaaatgttcccctggatgatggtatt
gatgatgagagctatcaatcattgtttaagccgataattggtaaagtgatggaagttttc
agacctggtgcagttgtcttgcaatgtggtgcagactctttatcaggggataggttgggt
tgcttcaatctctcaattaaaggtcatgctgaatgtgtgaaatacatgagatcttttaac
gtacccttactcttgcttggtgggggaggctacacaatacgcaatgttgctcgctgctgg
tgctacgagactggagttgcgcttgggattgagctagaagataagatgcctcaacatgag
tattatgagtactttggtcctgactatactcttcatgttgctccgagtaacatggaaaat
aagaattctcgtcagctactggatgaaatacgatcaaagcttcttgataatctctctaaa
cttcagcatgcaccaagtgtgcaatttcaagagcgaccacctgatacagaattccccgag
ccagatgaagatcaagaggatgacgatcgaagatcagatgattctgatatggatgaaaat
aatgagagtaaacctttctctggacgtgtgaagagggagcttcatgatatcgagtctaaa
gacatggatgatctaaaagaaggtgaacgctctagtgctagagatatggatgcgtcattt
gcagaaatatcccttaagggttcgaattcaggccccgcaccagcagatgtcaaactagaa
catggaagctcaaacaagccggaccagccttctgagatgaatttataa

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