Erigeron canadensis (horseweed): 122589705
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Entry
122589705 CDS
T07610
Name
(RefSeq) serine/arginine-rich SC35-like splicing factor SCL28 isoform X1
KO
K12900
serine/arginine-rich splicing factor 10
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122589705
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ecad01009
]
122589705
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ecad03041
]
122589705
Protein phosphatases and associated proteins [BR:
ecad01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122589705
Spliceosome [BR:
ecad03041
]
Common components
Common spliceosomal components
SR proteins
122589705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
122589705
NCBI-ProteinID:
XP_043617961
LinkDB
All DBs
Position
2:complement(14014797..14023317)
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AA seq
263 aa
AA seq
DB search
MGRYNDRSGGGGSRRRRSYSPRRSPPPQPRSRRYDDHRQRHRSPPAPSGLLVRNISLDSR
PEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRNPEDASEAKHQLNHCVLGGHEIT
IVYAEENRKTPREMRTTTQTSRRYGGSSGRQTPPRSSRRRSFSRSLSPTRHDSRDRDHRG
RDLVLPPRSRSPSFSASPHDARTYKTRHYSNSPGRNGKGAVDKMYRGSDQTVPHQRSHDK
RATQDLKVAVANEDDGHSRSLSR
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgggaagatacaatgacaggagcggcggcggcggcagcaggaggaggagaagttacagt
cctcgacgctcaccaccaccacaaccacgcagtcgccgttacgatgaccatcgccagcgg
catcgctcaccccctgctccttctggactcctcgttcgcaatatctctcttgattctagg
ccagaagatcttaggatcccttttgaacgttttgggccggtgaaggatgtctatcttcca
aagaactattatactggtgagccacggggctttggttttgtaaagttccgtaaccctgaa
gatgcatcagaagctaaacatcagctaaatcattgtgtgcttggggggcatgagataact
attgtttatgctgaagaaaataggaagactcctcgtgaaatgcggacaactacacagaca
agtaggcgttatggcggaagctctggtaggcagacccctcctagatcatctaggcgtcgg
tcattttcacgctctttatcaccgaccagacatgactccagggatagagatcatagaggc
agggatctggttttgccaccacgttcaagatctccttcattttctgcatcacctcatgat
gctagaacatacaagacaagacattactcaaatagtcctgggagaaatggtaaaggtgct
gtagacaagatgtatcgtggttcagatcagacagttcctcaccaacgttctcatgacaaa
cgagccacacaagacttgaaggtagcggttgcaaatgaggatgatgggcattcaaggtcc
ttatctaggtga
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