Erigeron canadensis (horseweed): 122592006
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Entry
122592006 CDS
T07610
Name
(RefSeq) ubiquitin-60S ribosomal protein L40-like
KO
K08770
ubiquitin C
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122592006
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecad04121
]
122592006
Ubiquitin system [BR:
ecad04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
122592006
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_L40e
Rad60-SLD
Ubiquitin_2
Sde2_N_Ubi
DUF2604
Rad60-SLD_2
TBK1_ULD
zf-C4pol
Ubiquitin_5
Dsc3_N
CFAP298
Plexin_RBD
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
122592006
NCBI-ProteinID:
XP_043620159
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Position
3:34949497..34956017
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AA seq
280 aa
AA seq
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MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGKGGYPKIDPNLRELALKHTENKNICRKCYARLHPRAVNCRKKKC
GHSNEFHKSGLIELADLIGKKKKIKIQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEG
IPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGRPNKTKIEPTLIAMAKKFN
QFKKVCRKCYARLPARATSCRKKKCGHSNQLRAKKPATME
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgcagatattcgtgaaaacattgaccgggaagaccatcacacttgaggttgagtccagt
gacaccatcgataatgtcaaggccaagattcaagacaaggaaggcattccaccagaccaa
cagcgtttgatttttgccggaaagcaacttgaggatggccgtactcttgctgattacaac
atccaaaaagaatcgacacttcacctggtcttgaggctaagaggaggaaagggaggatac
ccaaaaattgacccaaatttgcgcgaacttgcccttaagcataccgaaaataagaatata
tgtcgcaagtgctatgcacgtcttcacccgagggccgtgaactgcagaaagaagaaatgt
ggccacagtaatgaatttcataaaagcggtctcattgaattagcggatctcatcggaaag
aaaaaaaaaatcaagatacagatatttgtgaaaactttgacagggaaaaccatcacactt
gaggttgaaagcagtgacaccattgacaatgtcaaggccaagattcaagacaaggaaggt
attccaccagaccagcagcgtttgatctttgccggaaagcagcttgaagatggtcgtact
cttgctgattacaacatccagaaagaatcaactcttcatttggtgttgaggctaagggga
ggaagaccaaacaaaacaaagattgaacctactttgatcgctatggctaagaagtttaac
caattcaagaaagtttgccgcaagtgctatgcacgtctccctgcaagggctacaagctgc
aggaagaagaagtgtggccacagcaaccaattgagggcaaaaaagccggctacaatggag
taa
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