Erigeron canadensis (horseweed): 122599838
Help
Entry
122599838 CDS
T07610
Name
(RefSeq) putative disease resistance RPP13-like protein 1
Organism
ecad
Erigeron canadensis (horseweed)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NB-ARC
Rx_N
LRR_4
LRR_8
AAA_14
AAA_22
AAA_16
nSTAND3
AAA_18
NACHT
Motif
Other DBs
NCBI-GeneID:
122599838
NCBI-ProteinID:
XP_043628361
LinkDB
All DBs
Position
5:42991999..42996697
Genome browser
AA seq
1291 aa
AA seq
DB search
MAEIIAYDILKMVIQKLATEAKNKYVRCQQIHSDLKNLERSLTQITNVLNDAFEKEITSQ
AVKQWLNALQHLAYDIDDILDGLATETMHYEFTRQQSAASITSKVRKLIIPTCCTNLSLS
NRMHQKLDNITNRLQDLEKEQNRLGLIVKDGRSTNINRKSQTSLVDASSIVGRQREKDEL
VHRLLLGGDEQCEHNNFSVVPIVGMGGVGKTTLARLLYDEKQVNDCFQLKAWVCVSDDFD
SFTISKVIFQSLTGENKDFADLNLLQVALREQLSDKRFLLVLDDVWSESCEDWETLVSPF
HACAQGSKIIMTTRKEKLLKKLGYNHLNQLQSLAHDYAMTLFAQHALGVNNFDSHPTLRP
HGEGIVKKCNGLPLALKALGRLLRTKLDEEEYWNEVLNSEIWRLEDGGGIVPALRVSYHD
LSAPLKRLFAYCSSFPKDYMFDREELVLLWMAEGLLRQSPPTNLTEERLGHEYFEDLLSR
SFFQHAPNESFFVMHDLMNDLATSVAGEFFLKLDNDTEKDIRKEVSGKYHHLSFVRERFV
TYKKFEEISKAKSLRTFMATSAGLVESWQRFYLSNRILVDLVPRLLLLRVLCLSNFEISE
VPQSIGSLRHLRYLNLSQTKITHLPESVSNLYNLHVLIVFGCSVLAKLPKSFSKLKNLRH
FDIRNTPCLNKLPSGIGDLTNLQTLSKIIIEGENGFEITELNGLKNLCGKISIHGLDKVQ
SSIHAREANFSIKRLSELDLEWSDVFDVSRKEMVEKEVLNELKPRNESLKQLKVVSYGGT
ELPNWVGDPSFLRLKHVSIHGCKRCLSLPSLGQLPSLKTLSIKDLHEVKVVGLELLGTSG
TSGTFPSLEILKFKDMSGWEVWSANSGIVFPCLKELHISSCPKLAEVSLELLPSLRVLKV
SGCGDGVLKSLVQIASTVSKLKIKRISGLTDDVWRGVKKYVGAVEELRISWCEEIKYLWE
SAAKASKVLVKLRNLEVADCDNLVSLGKKEEGDCGSILHITSLRILNCKNMERCNVPNSL
ETLNLFHCDSITEISFPSGGGQKLKSVCIGGCKKVMKKELGGYGGGRDKSMMLLNNVSMP
ILEDLRIHNMPLLKFIIELNCFIRLTTLVIYDCSSLESFPDHQLLGLVSLKSMYITDCLR
LDASFPRGLWPPKLCQLTIGRLKKSILEWGPQNFPLSLVDLSLFGGSSSDDQEDVIDFSQ
LSHLFPSSLAHLEISDFEKLETVSRGLQHLTSLQRLSFYTCPNIKDLPEMLFPSLLSLRI
CDCPYLKERCSRNGSYWPLISHIPSIGILPK
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaatcattgcttatgacatcctcaaaatggttatccagaagctggccactgaa
gctaagaacaaatatgttcggtgtcagcaaattcattctgatctcaaaaacttggagagg
tcgttgacccagatcacaaatgtgctcaatgacgcttttgaaaaagaaataactagtcaa
gcagttaaacagtggctgaatgctctccagcatctggcttatgatatagacgatatactt
gacggtctggcaacagaaaccatgcactatgaattcacccggcaacaatctgcagcaagc
atcaccagcaaggtaagaaagctcatcatcccgacttgttgcacaaatttatcacttagt
aataggatgcatcagaagttggataatattaccaataggttgcaagatcttgaaaaagaa
caaaataggcttggtttgattgtgaaagatggaagatcaacaaatataaatagaaagtcc
cagacctctttggtagatgcatctagtattgttggacgacaaagggagaaagacgaatta
gtccatagattattattggggggtgatgaacaatgtgaacataacaactttagcgttgtt
cccatagttggcatgggcggagtgggtaaaactaccctggctagacttttgtatgacgaa
aagcaggttaatgactgtttccaactcaaggcatgggtttgtgtttcagacgattttgat
agcttcaccataagtaaagttatctttcaatctttaacgggtgaaaacaaagattttgca
gatttaaatctccttcaagtagctcttagagaacaactaagtgataaaagatttctgcta
gttttggacgatgtatggagcgaaagttgtgaagattgggaaacccttgtaagtccgttt
catgcatgtgctcaaggaagtaaaatcataatgacaacacgaaaggagaaactgctcaaa
aagttgggttacaatcatttaaaccagctgcagagtctggcacatgattatgctatgaca
ttattcgctcagcatgcattgggtgtaaataactttgattcacatccgacgctcaggcca
catggtgaaggcattgtgaaaaaatgtaatggcttgcctttggctttaaaagcacttggt
agactattgaggacaaaactagatgaagaagaatactggaacgaagttttaaatagtgag
atttggaggctagaagacgggggtggaatagttccggctcttagagtaagctaccatgat
ctttctgcacctttaaaacggttgtttgcatattgctcctctttccccaaagactacatg
tttgacagggaggagttggttttgttgtggatggccgaagggctattacgccaatcacct
cctaccaatttgacagaagaacgcttgggtcatgaatattttgaagatttgttgtcaaga
tcattttttcaacatgcacctaatgagtcattttttgtaatgcatgacttgatgaatgac
ttggccacatctgttgctggagagttctttttaaagttggacaatgatacagagaaggat
atcaggaaagaagtttcgggaaagtaccatcatctatcattcgttcgtgaacgatttgta
acttacaagaagttcgaggaaatcagcaaagctaaaagtttaagaacattcatggcaaca
tctgccgggttagtagaaagttggcaacgtttctacttatcgaataggattctcgttgac
ttagttcctcggttattattgttaagggttctatgcttgagtaactttgagataagtgag
gtgcctcaatcgataggtagtctaagacacttgcggtatcttaatctatctcaaactaaa
atcacccatctaccagaaagcgtcagcaatctctacaacttacatgtattgattgttttt
ggctgttctgttctggctaagttgcccaaaagcttctcaaaactgaaaaatctacgacat
tttgacattcggaatactccctgtttgaataagttaccgtcggggattggtgacttgact
aacttacaaactctctccaagattattattgaaggtgaaaatggatttgaaataacagag
cttaatggtttaaaaaatctatgtgggaaaatctctatccacgggttggataaagtgcaa
agttcaattcatgcacgagaagcgaacttttcgataaagaggcttagtgagttagatttg
gaatggagtgatgtgtttgatgtttctagaaaggaaatggttgagaaagaggtcttaaat
gagctgaagcctcgtaatgaaagcttgaaacaactcaaagtggtgtcttatgggggaaca
gagcttccaaattgggttggggatccgtcgtttcttcggttgaaacatgtgtcaatacat
ggctgtaaaagatgtttatctctaccatcattggggcagttaccgtcacttaaaactttg
tctattaaagacctgcatgaagtgaaagttgtgggtttggagttacttgggactagtggt
acgtctggtacatttccttcacttgaaattctaaagtttaaagatatgtcggggtgggag
gtgtggtcagccaatagtgggattgtgtttccatgccttaaggagcttcatataagctct
tgtcctaaattggctgaagtctcactggaattactaccttcattgagggtattaaaagta
agtggatgtggcgatggcgtgctgaaaagtctggttcaaatagcttcaacagtctccaag
ttgaaaataaagaggatttcagggcttacagatgatgtgtggagaggtgttaaaaaatat
gttggtgcagttgaagaattaaggattagttggtgcgaggagataaaatacctgtgggaa
tcagcagcaaaggcaagtaaggttcttgtgaaactaaggaacttggaagtagcagattgt
gataatttggtgagtttaggaaaaaaagaagagggtgattgtgggagcattctgcacata
acatctcttaggatattgaactgtaagaatatggagcgttgcaatgttccaaatagtctt
gagacgttgaatctctttcattgtgattcaattacagaaatctccttcccatcaggagga
gggcagaagctcaagtcagtttgtattgggggatgcaagaaggtaatgaaaaaggagctc
ggaggatatggaggaggaagagacaagagtatgatgcttttaaacaacgtttccatgcca
attcttgaagatttacggattcataatatgccacttctgaaattcatcattgaattaaat
tgcttcattcgcctcactacgttggtaatatatgattgttcaagtcttgagtcgtttcct
gatcaccagttgttgggtctggtctccttaaaaagtatgtatattacagattgtctgaga
ttggatgcctcctttcctcgtgggctttggcctcccaagttgtgtcaacttacaattggg
cggttgaagaagtccatcttggaatggggcccacagaattttcctctctcacttgtagac
ctaagcttattcgggggatcgtcatcagatgatcaagaggatgtgattgattttagtcaa
ttgtcccatctcttcccttcgtctcttgctcacttggaaatatctgattttgagaaactg
gaaacagtttcaaggggactccaacacctcacctccctccaacgtctctccttttataca
tgcccaaatataaaagatttaccagaaatgttgtttccttcgcttttgagtttacgcatc
tgtgactgcccatatctgaaagaaagatgcagcagaaatggctcctactggcccctcatt
tcccatatcccttccattggcatactccctaaatag
DBGET
integrated database retrieval system
