Erigeron canadensis (horseweed): 122604150
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Entry
122604150 CDS
T07610
Name
(RefSeq) TMV resistance protein N-like
Organism
ecad
Erigeron canadensis (horseweed)
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Gene cluster
GFIT
Motif
Pfam:
TIR
NB-ARC
TIR_2
LRR_4
C-JID
LRR_8
AAA_16
AAA_22
nSTAND3
AAA_14
AAA_18
AAA
NACHT
Motif
Other DBs
NCBI-GeneID:
122604150
NCBI-ProteinID:
XP_043632984
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Position
6:4073246..4078228
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AA seq
1129 aa
AA seq
DB search
MASTSSSSISIQTTGWTYDVFLSFRGEDTRNNFVDHLFAALVQKGIKTFKDDEILGGGQP
ISEELLKAIKESRFSVVVFSKNYAKSSWCLEELSMIMECHDQMRSQKKVLPVFYHVDPSD
VRGQKRDFVTAFETHEDRFKGEMEKVNKWRSALTAVASLSGYHISTVSGGEYAIIDKIVQ
EILHNIQPLGNEICIIGIESHMEILNSLLIMEATQNVRIIGILGMGGIGKTTIARALFRR
ISYKFQGSCFVKDVRQNSSSDNDICALQKKVLKDILGVDQGFSILDPEDGAGMIKERFYN
KKVLLVLDDVHDMKQLEFLAATHEWFGPGSRIVITTRDRHILADANDIYKPPLLRKDQAT
ELFSRHAFRKNSPPDGYLELSDRAINYTGRLPLALKVLGSFFRGREARVWGSALDRLAKI
PSSEIYEKLKLSFDDLDPYEQKIFLDIACFYKGEKLEDVTRILDSFGFDPVIGISVLIEK
SLITVSKEELGMHDLIQEMGWQIVRESAPNSRLWKRDQILGVIHKSRELDAIEAIVEPFS
GRRTGFNADIFRSMKNLRLLHVDLQFTSEAPTFFPDELRWLHWEQYPYSSLPDMCKLVGL
DMILSKIEHLWNGQQSMLNLKFINLKGCKLARFPDVSGAPNIERLILAKCNRLVDVHESL
GYLKRLVYLDMSYCNHLKCLPSRIEMDSLETLLLIECTSLERIPKFSPCMVKLSYMNLQY
CRRIEELPSSIKYLSNLSFLNLQYCYSLKNIPNSLGKLKCLKCLCLNECSKLLKLPDELG
HIEKLEELHIRRAKSFIFRNLPALSFLRKLVLSDNKIRDEDFPKNLQGFSALEELHLDEN
GELMELPSITNLSNLRYLDLTGCRRLQKFHGLPVGIQILKADDCVSLEKINDLSEDHKYL
YKISLVGCHKLIKDEMNERYLANMLRKSVLQRCAAVGHCLSISIPGRKIPSWFNQQEDGG
KIALHLPPGWQTQTMGFAICGSSSGGFYQQISFRFEDGETFLKDWYEKDDQNDNKHCDHL
WISFVPFSLIQNKKLDHNDFEHEDWSLVTEGNLVIKVSPKNIARPVRCGAHVVYKEDLES
TQQSKSPSISSSTSSSPPYWNWEIINRFRNSLMCIEPEPKPKDGIKWPK
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atggcttctacatcgtcttcatcaatctctatacaaacaacaggatggacatatgatgtg
tttctgagttttagaggtgaagatactcgcaacaactttgttgatcatctttttgcagct
ctcgttcagaaaggaataaagacgtttaaagacgatgagattctcggtggaggccaaccc
atctcagaagagctattgaaagccataaaagaatcaaggttttctgttgttgttttctct
aaaaactatgcaaagtcttcttggtgtttggaagagctttccatgatcatggaatgccat
gatcaaatgcggagtcagaagaaggtgttacctgtgttctaccatgtcgatccatcagat
gttcggggacaaaaaagagatttcgtgacggcattcgagacgcatgaagacaggtttaaa
ggagagatggagaaagtgaacaaatggaggagtgctttaactgcggttgctagtttatca
ggctatcatatctcaacagtcagtggaggtgaatatgcaattatcgacaagattgttcaa
gagatcttgcacaatatacaacctcttggtaatgagatttgtataattggtatagagtct
catatggaaatattaaattcattactgatcatggaagcaacccaaaatgttcggatcata
ggaatacttggaatgggagggattggtaagactactattgcccgagcattgtttagaaga
atttcatataagtttcaaggtagttgctttgttaaggatgttagacaaaatagttctagc
gataacgatatatgtgcattacagaaaaaagttctaaaagacattctgggagtggatcag
ggttttagcattctggatcctgaggatggggcaggcatgataaaagaaagattttacaac
aaaaaagttcttcttgttcttgatgatgtgcatgatatgaagcaattagagttcttagct
gcaacacatgagtggttcggtccaggaagcagaatagttataaccactagagacagacat
atattggcggatgcaaatgacatttacaaacctcctcttttacgtaaagaccaagctact
gagctttttagcaggcatgcatttcgaaaaaatagccctccagatggatacttggagctt
tcagatcgtgcaataaactatacagggcgtcttcctcttgccttgaaagtcttaggctcc
ttcttccgcggaagagaagcacgtgtgtgggggagtgctttagatagactagccaaaata
ccatctagtgagatatatgagaaactaaagttaagctttgatgatctagatccttatgag
caaaaaatattcttagacattgcatgtttctataagggtgaaaaattagaagatgtcact
agaatacttgatagctttggttttgacccggtcatagggattagtgttcttatagaaaaa
tcgcttataaccgtttcaaaggaagagctaggtatgcatgaccttattcaagaaatgggt
tggcaaatcgttcgtgagagtgccccgaatagcaggctatggaaacgtgatcaaatactt
ggtgtcatacacaaaagcagagaacttgatgctattgaagccatcgtggagccattttca
ggaaggaggacgggttttaacgctgatatatttagaagtatgaagaatcttcggctactc
catgttgaccttcaattcacttccgaggcacctacctttttccctgatgagttacgatgg
ctacattgggagcaatacccatattcatccctgccagacatgtgtaagcttgttgggctt
gacatgattcttagcaagattgaacatttatggaatgggcaacagagtatgctaaacttg
aagttcattaaccttaaaggttgcaagctagcaaggtttccagatgtctcgggtgcacca
aatattgagaggttaattttggcaaaatgtaatagattggtggatgttcatgagtctctt
ggttatctgaaaaggcttgtttacttggacatgagttattgcaatcatcttaagtgtctt
ccatctaggattgagatggactccttggagaccctacttctcattgagtgtacatctctt
gaaagaatcccaaaattctccccgtgtatggttaagttatcttatatgaatttacaatat
tgtcgaagaatagaagagctgccatcatccattaaatatctctccaacctaagcttcttg
aatcttcagtattgttacagtcttaagaacattccaaactctttaggcaagttaaagtgc
ctcaagtgcctctgtctgaatgaatgctcgaagctgttgaaattgcccgatgagttagga
catattgaaaagttagaagagcttcatatacgaagagcaaaatcctttatatttcggaat
ttgccagcattgtctttcttgagaaaattagttctaagtgataataaaattagagatgaa
gacttccccaaaaatcttcaaggattttcggccttggaagagttacatctagatgagaat
ggtgaattgatggagttaccttctattaccaacctttctaaccttagatacctagactta
acggggtgtcgtcgacttcaaaagtttcatgggcttccggtaggaatacagatattaaaa
gctgatgattgcgtctcactggaaaagataaatgatttatcagaagatcataaatactta
tataaaatatcgctggttggttgccataaactcataaaggatgaaatgaatgaaagatat
cttgctaacatgttaaggaaatctgttcttcagagatgtgctgctgtaggccattgttta
agtatcagtatacctggaagaaaaattccaagttggttcaatcaacaagaagatgggggt
aaaatagcattgcacttacctcctggatggcaaacccaaacaatgggctttgcaatatgt
gggtcgtcctcaggaggtttttatcagcaaatttcattcagatttgaagacggtgaaacg
tttttaaaagattggtatgagaaggatgatcagaacgataataagcattgtgatcatctg
tggattagttttgtaccattcagcttaattcaaaacaagaagttggatcataatgatttc
gaacatgaagattggtctctcgtcacggaaggtaatcttgttattaaagtatcaccaaag
aatattgcaaggcctgttagatgtggagcacatgttgtgtacaaagaggacctggaatcc
acccagcaatctaagtctccatctatctcctcatccacttcttcttctcctccttactgg
aattgggagataataaatcggttcagaaactctctcatgtgcatagagccagagccgaag
ccaaaggatggtatcaaatggcccaagtga
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integrated database retrieval system
