Erigeron canadensis (horseweed): 122604993
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Entry
122604993 CDS
T07610
Name
(RefSeq) hydroxymethylglutaryl-CoA lyase, mitochondrial isoform X1
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad00280
Valine, leucine and isoleucine degradation
ecad00650
Butanoate metabolism
ecad01100
Metabolic pathways
ecad04146
Peroxisome
Module
ecad_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
122604993
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
122604993
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
122604993
Enzymes [BR:
ecad01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
122604993
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Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-GeneID:
122604993
NCBI-ProteinID:
XP_043633785
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Position
6:8651067..8657448
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AA seq
414 aa
AA seq
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MSSLEEPIGMDKLPSLSNIDFFHRFSSNGCSTSGGITGMGSCWIEGNASSVYSDEEDFEY
QEEEFTWRQHARNVSRIGNRATYGNGCSARHLANFQHNSYCSNGGLQEITNKFFKGIPKY
VKIVEVGARDGLQNENNMVPTSVKVELIQRLVSAGLSVVEATSFVSPKWVPQLADARDVI
GSVKNLDTARLPVLVPNLKGFEAAIAAGAKEVAVFASASESFSKSNINCTVEESFDRYRA
VVNAATKLNVPVRGYVSCVIGCPVEGMVHPSKVAYVAKELHGMGCFEISLGDTIGIGTPG
TVIPMLGAVMAVVPVEKLAVHFHDTYGQSLPNILVSLQMGISTVDSSVAGLGGCPYAKGA
SGNVATEDVVYMLDGLGIKTNVDLGKLLQTGEFICKQLRRSSGSKAAVAFSRVP
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtctggaggagcctattggtatggacaagttgccaagcctaagcaacattgat
tttttccatagattctcgtccaatggctgcagtactagtggaggcatcactggaatggga
agttgctggattgagggaaatgcttctagtgtatatagtgatgaggaggattttgagtat
caggaagaagagtttacttggagacaacatgcgagaaatgtatctcggattggtaaccgt
gcaacatatggaaatgggtgtagtgcacgacatttagcgaattttcagcataactcatac
tgcagtaatggaggtctgcaagagataacaaataagtttttcaaaggcataccgaaatat
gtgaagatagtagaagttggtgcaagggatggattacaaaatgaaaacaatatggtacct
acatctgtgaaagtagaactaattcagaggcttgtttctgctggattgtctgtcgttgag
gccacaagctttgtttcgcccaagtgggtacctcagcttgcggatgcaagggatgtcatt
ggatcagtcaaaaacttggatactgcaagattgcctgtattggtaccaaacttgaagggt
tttgaagctgccattgctgcaggagcaaaggaagtagctgtatttgcatcagcatctgag
tccttctcaaagtcaaacattaactgtactgttgaagaaagctttgaccgttaccgtgct
gttgtcaatgctgctacaaagctcaatgttccggttcgtgggtacgtatcatgtgtgatt
ggatgcccagttgaaggaatggttcatccatcaaaagttgcatatgttgcaaaagaactt
catggtatgggttgttttgaaatatcactcggtgatactatagggattggcacaccaggc
acggttattcctatgcttggagcagtcatggcggttgttcctgtggaaaagcttgcggtt
cacttccatgacacttatggccaatctcttccaaatattttagtttccctccaaatgggt
ataagcacagtggattcctctgtagctggtctcggaggatgcccgtatgccaaaggagct
tcaggaaatgttgctacagaggatgtagtttacatgcttgatggccttggcataaaaacc
aatgttgatctgggaaagctcttgcaaacaggtgaattcatctgtaagcagttacgtcgc
tcatcagggtctaaagctgctgttgcttttagccgagttccataa
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