Erigeron canadensis (horseweed): 122610964
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Entry
122610964 CDS
T07610
Name
(RefSeq) carotenoid 9,10(9',10')-cleavage dioxygenase 1-like
Organism
ecad
Erigeron canadensis (horseweed)
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Gene cluster
GFIT
Motif
Pfam:
RPE65
Motif
Other DBs
NCBI-GeneID:
122610964
NCBI-ProteinID:
XP_043639850
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Position
8:complement(45302925..45306850)
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AA seq
595 aa
AA seq
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MAAQELILGFSEKSLSVILSLFVFLFPVKQPMIGEWAIATLKSEASKAIKMAPLAIFNTL
VDSIFQFVDQPMLPSQANFAPVDEIGEPVKVSFSHGEIPGDFPEGVYIRNGSNPLFGGLK
STVSVFGKTDSMWIEGEGMLHALYFTKDPEGNWTVSYNNRFVETETYKMERERNRPCFLP
VVEGDPPAALVSAFFNMLRFGEVNKIMSNTNVFEHGGKYYSIAENYVPQEIDLVSLETYG
NWNLNGAWTRPFTSHPKKVPGTGELVTLGFEPTKPYCVMGVISVDGEELIHKFDLQLDHC
SLFHEVGVTKQYNILIDSRLTISRERVMRGGQLFKYEGEKDARIAVIPRYGDADSIKWFH
IEPCCTYHLLNSFEDGDEVVVRGCKADAAIIPGPGWGENKFEWFSKGFSYKSVDSNNQNG
HGMTKEGILFTRVREWRLNLETMEVKEKDITGTEHSMDFPMINADFTGLKHQYGYTQVID
SLASSKSAKTKYGGLAKLYFEVKADEQDTNGEQTLKTEYHWLPKNNFCTGSAFVAKPEAI
DEDDGWIITYAHDEDTNESYVLVIDAKKFCDEPIAKINLPQRVPYGHHGCFFAST
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggcagctcaagaacttattttaggattctcagagaaatcattatcagtgattctgtct
ttgtttgtattccttttccctgtcaagcagcccatgataggggaatgggcaatagcaact
ctcaaaagtgaagctagtaaagctatcaagatggctcctttagcaatattcaacaccctt
gtggattccatttttcaatttgttgaccaaccaatgcttccgtcacaggcaaacttcgcc
cccgttgatgaaattggtgaacctgtaaaagttagttttagtcatggggagattcccgga
gattttccagagggcgtttacattagaaacggttcaaatcctctatttggaggtttaaaa
tctacagtatcggtgtttggaaaaacagacagcatgtggattgaaggagaagggatgctt
catgctctgtatttcaccaaagatccagaaggaaattggaccgtctcctacaacaatcga
tttgtggaaacagaaacatataaaatggaacgtgagagaaatagaccttgctttcttcct
gttgtagaaggagatcccccagctgcactggtttcggcatttttcaacatgctgagattt
ggggaagtcaacaaaattatgagcaacaccaatgtttttgagcatggaggaaagtactat
tcaattgctgaaaattatgtgccacaagagatagatttagttagtcttgaaacttatggt
aattggaacctgaatggagcttggactcgaccttttacatcccacccgaagaaagtacca
ggtacaggagaactggttaccctagggtttgagccgacaaaaccatactgtgttatgggt
gtaatctcagttgatggggaagagcttatccacaagttcgatctacaactagatcattgt
tcactattccatgaagtaggtgtcacaaaacagtacaacatattaattgattctaggctc
acgataagcagagaaagggttatgagaggaggccagttatttaagtatgagggggagaaa
gatgcaagaatcgcagtgattcctcgctatggtgatgctgactcaattaagtggtttcat
atagaaccatgttgtacttatcacctactgaacagctttgaagatggagatgaggttgtt
gtgagaggatgtaaggctgatgcggccattattccaggacctgggtggggtgagaataag
tttgagtggttctctaaaggatttagctataaatcagtggactcaaataatcaaaatggt
catggaatgacaaaagaaggaatattattcactagagtcagggaatggcgattgaacttg
gagacgatggaggtaaaggagaaagatataactggaaccgaacactcgatggacttccca
atgatcaatgcagattttacaggtcttaaacatcaatatggatacacacaggttattgat
tcccttgcaagctctaaatcagcaaaaactaaatatggtggactcgccaagttgtacttt
gaagtaaaggccgacgagcaagacaccaatggtgaacagactttaaaaacggagtatcat
tggttacccaaaaataacttttgtacaggatcggctttcgtggcaaagccagaagccata
gatgaagatgatggttggatcattacatatgctcatgatgaagacacaaacgaatcttat
gtattggtaatcgatgctaagaaattttgtgatgagccaatagccaagattaatctccct
caacgggtgccatatggtcatcatggttgtttctttgcatctacataa
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