Enterobacter cancerogenus: CWI88_04410
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Entry
CWI88_04410 CDS
T05545
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
ecan
Enterobacter cancerogenus
Pathway
ecan03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ecan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CWI88_04410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecan03400
]
CWI88_04410
Enzymes [BR:
ecan01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CWI88_04410
DNA repair and recombination proteins [BR:
ecan03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CWI88_04410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_22
AAA_25
AAA_11
bDLD3
Motif
Other DBs
NCBI-ProteinID:
AUJ80334
LinkDB
All DBs
Position
920702..924244
Genome browser
AA seq
1180 aa
AA seq
DB search
MTDTAESLDPLRLPLQGERLIEASAGTGKTFTIAALYLRLLLGLGGNAAFPRPLSVEELL
VVTFTEAATAELRGRIRANIHELRIACLRQTTDNPLYASLLEEIADKQQAAQWLLLAERQ
MDDASVFTIHGFCQRMLSLNAFESGMLFEQQLIEDESELRYQACADFWRRHCYPLPRDIA
EAVHALWKGPEDLLRAIGRYLQGEAPVIKSPPPADETLASRHEKIIAQIAGLKQKWNESV
GDIDAIIENSGIDRRKFNRGNQGKWIEKISAWAQEETRGYQLPDALEKFSQRFLAERTKA
DGIVPEHPLFVSIEALLAEPLSLNDLIITRAMAEIRDAVAREKRRRGELGFDDMLSRLDE
ALRSENGEALAHAIRTRFPVAMIDEFQDTDPQQYRIFRRIWRQQPETALLLIGDPKQAIY
AFRGADIFTYMKARSEVEAHYTLDTNWRSSPGMVESVNALFERMDAAFMFREIPFKPVKS
ASKNADLRFEYNGAVQPAMRFWLLDGEGYGVADYQTAMAQHCAAQIRDWLSAGSRGEALL
WKGENATPVKASDITVLVRSRQEAALIRDALTLLTIPSVYLSNRDSVFDTLEAQEMLWLL
QAVLAPERESTLRSALASSMLGLNARDIDALNNNETAWDAVVDEFVHYRERWQKRGVMAM
LRELMAQRRIAENLLATAGGERRLTDILHISELLQEAGSQLESEHALVRWLSQQIADPNS
NASSQQMRLESDKHLVQIVTIHKSKGLEYPLVWLPFIANYRVQDQAFYHDRETFEAVLDL
SKAETSVELAEAERLAEDLRLLYVALTRSVWHCSLGVAPLFRRRGEKTGETDFHLSALGR
LIQRGEPKDAAGLRQCIESLCGDHIALHVPELPDNRRWHLPEQTEPDLNARPIVRTVADD
WRVTSYSGLQQHGQSIAQDLMPKLDIDAAGVGEVPVEPVLTPHQFPRGASPGTFLHSLFE
ELDFTQPVSEAWVEKMLQSGGYEAKWQPVLTEWVNAILQAPLTEEGISLSQLTAKDKQVE
MEFYLPIASPLRAEALDALIREYDPLSAGCPPLNFRQVQGMLKGFIDLVFRHQGRYYLLD
YKSNWLGENSDAYTQQAMASAMQMHRYDLQYQLYTLALHRYLRHRMADYRYEDHFGGVIY
LFLRGVDPANPSSGIFSTRPDAMLIEKMDTLFAATQEEMA
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgaccgataccgctgagtcccttgatcccttacgtttgccgctacagggtgaacggttg
attgaagcctcagcgggaacgggaaaaaccttcaccatcgccgcgctttaccttcgcctg
ttattggggctgggcggcaatgccgcgtttccacgcccgttaagcgtggaagagctgctg
gtggtgacattcaccgaggccgccaccgccgagctgcgcggccgtattcgcgccaacatc
catgagctgcgcatcgcctgcctgcgtcagaccacggataaccctctctatgcgagtctg
ctcgaagaaattgctgataagcagcaggcggcccaatggctactgttagccgaacggcaa
atggacgacgcctccgtcttcaccatccacggtttttgtcagcgcatgttgagcctgaat
gcctttgaatccggcatgctgtttgaacagcagctcatcgaagatgagtcggagcttcgc
tatcaggcctgtgcggatttctggcgtcgtcattgttatccgctaccgcgcgatattgca
gaagcggtgcatgctttgtggaaaggtccggaagatctgctgcgcgccattggccgctac
ctgcagggtgaagcaccggtgatcaaatccccgccgccagcagatgaaacgctggcctcg
cgtcatgaaaagatcatcgcgcaaatcgccggattaaagcagaagtggaatgagtccgtt
ggcgatattgatgcgatcattgaaaactcgggtatcgacaggcgcaagttcaatcgcggt
aatcagggcaagtggatcgagaagatcagcgcctgggcgcaggaagagacgcggggctat
cagctcccggacgcgctcgagaaattctctcagcgcttccttgcggagcggaccaaagcc
gatggcattgtgcctgaacaccccttatttgtttccattgaggcgctgctggctgagccg
ctctcgctcaatgacctgattattacccgcgcgatggctgaaattcgcgacgctgtggcg
cgggagaaacgccgacggggcgaactcggatttgacgatatgctgagccggctggacgag
gcgctacgcagcgaaaatggcgaagcgctggctcacgctatccgtacccgttttccggtg
gcgatgatagatgaatttcaggataccgatccccagcagtaccgtattttccgccgcata
tggcgacagcagcctgaaaccgcactgctgctgatcggcgatcccaaacaggctatttac
gcttttcgcggggcggatattttcacctatatgaaggcacgcagtgaagtcgaggcgcac
tatacgctcgataccaactggcgctcctctcccggcatggttgaaagcgtcaatgcgctg
tttgaacggatggacgcggcgtttatgttccgggaaattccctttaagccggtaaagtcc
gcctcgaagaatgccgatctgcgttttgaatataacggcgcggtgcagcctgccatgcgt
ttttggctgctggacggtgaaggctacggcgtggctgactatcaaaccgcgatggcgcag
cactgtgccgcgcaaatccgtgactggctgagtgcaggttcgcgtggcgaagcgctgctg
tggaagggggagaacgccacgccggttaaagcctctgatatcacggtgctggtgcgcagc
cgccaggaggcagcgctgatccgcgacgcgcttacgctgctcaccattccttctgtttat
ctctcaaaccgcgacagcgtattcgacaccctggaagcgcaggagatgctgtggctgctg
caggcggtgctggcgcctgaacgtgaaagcacgcttcgcagcgcgctggcgagctccatg
ctggggcttaatgcccgcgacattgacgcactcaataacaatgaaaccgcgtgggatgcg
gtggtggacgagtttgttcattaccgtgagcgctggcaaaaacgcggcgtgatggcgatg
ctgcgtgaactgatggcgcaacgccgtattgcggagaatctgctggcgacggcaggggga
gagcgccgcctgacggatatcctgcacatcagcgaactgctgcaggaagccggttctcag
ctggaaagcgaacacgccctggtgcgctggctgtcgcagcaaattgccgatccgaacagc
aacgcgtcaagccaacagatgcgccttgaaagcgataaacatctggtgcaaatcgtcacc
attcacaaatctaaagggctggaatacccgctggtctggctgccgtttatcgctaactac
cgcgtgcaggatcaggcgttttatcacgatcgtgagacctttgaggcggtgcttgatctc
agcaaagccgaaaccagcgtggagctggcagaagccgaacggctggcggaagatctgcgt
ctgctgtacgtggcgcttacccgttccgtctggcactgcagcctgggggttgcgccgctc
tttcgccgccggggtgaaaaaacaggcgagacggatttccatttgagcgccctggggcgg
cttatccagcgcggcgaaccgaaagatgcggctgggctgcgtcaatgtattgaatcgctc
tgcggcgaccatatcgctctgcatgtacccgagcttcccgacaatcgtcgctggcatcta
cctgagcagaccgagcctgatctcaacgcccggccgattgtccgaaccgttgcggacgac
tggcgggtaaccagctactcaggcttacagcagcacggccagagcattgctcaggatctg
atgccgaagctggatatcgacgcggcgggcgtcggcgaggtgcctgtcgagcctgtactg
acgccgcatcagttcccgcgcggcgcgtcgcccggtacgttcttgcatagcctgtttgaa
gagctggatttcacgcagccggtatcggaggcgtgggtggaaaagatgttgcaaagcggc
ggctatgaggcgaagtggcagcccgtgttgaccgagtgggtcaatgccatcctgcaggcg
ccgctgacggaagagggtatctctctgagccagttgacggccaaagataaacaggtggag
atggagttttacctgcctatcgccagcccacttagggctgaggcgcttgatgcgctgatc
cgcgaatacgatccgttgtctgccgggtgcccgccgctcaatttccgccaggttcagggg
atgctgaaagggtttattgaccttgtgttccgccatcaggggcgttactacctgctagat
tacaaatcgaactggctgggtgaaaacagcgacgcctacacccaacaggccatggcttct
gccatgcagatgcatcgttatgacctgcaataccagctctataccctggcactgcatcgc
tacctgcgccatcgcatggcggattaccgttacgaagaccattttggcggcgttatctat
ctcttcctgcgtggcgtggacccggctaacccgagttccggcatcttcagtacgcggcct
gacgcgatgctgattgaaaagatggataccctttttgccgcaacccaggaggagatggca
tga
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