Enterobacter cancerogenus: CWI88_15555
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Entry
CWI88_15555 CDS
T05545
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
ecan
Enterobacter cancerogenus
Pathway
ecan03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ecan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CWI88_15555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecan03400
]
CWI88_15555
DNA repair and recombination proteins [BR:
ecan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CWI88_15555
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CWI88_15555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
UB2H
AAA_30
Helicase_C_2
SBDS_domain_II
AAA_22
DUF87
IF2_N
Motif
Other DBs
NCBI-ProteinID:
AUJ82390
LinkDB
All DBs
Position
complement(3269477..3271492)
Genome browser
AA seq
671 aa
AA seq
DB search
MSKPFKLNSAFRPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTVANVIADLQRPT
MVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMIIDQRAILRRLAELQ
YTRNDQAFQRGTFRVRGEVIDIFPAESDDMALRVELFDEEVERLSLFDPLTGHIESVIQR
FTVYPKTHYVTPRERIVQAMEDIKAELADRRKVLLANNKLLEEQRLSQRTQFDLEMMNEL
GYCSGIENYSRYLSGRGPGEAPPTLFDYLPADGLLVIDESHVTIPQIGGMYRGDRARKET
LVEYGFRLPSALDNRPMKFEEFEALAPQTIYVSATPGNYELEKSGEDVVDQVVRPTGLLD
PIIEVRPVATQVDDLLSEIRLRSAINERVLVTTLTKRMAEDLTEYLEEHGEKVRYLHSDI
DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNVNGKAILYGDKITPSMAKAIGETERRREKQQRYNEEHGITPQGLNKKVVDILALG
QNIAKTKTKGRGKARPVVEEDTVALTPKALQQKIHELEGQMMQHAQNLEFEEAAQIRDQL
HQLRDLFIAAS
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaccgttcaaattgaattccgctttccgtccatcgggggatcagcctgaggcg
attcgccgcctggaagaggggctggaagatgggcttgcacaccagacgctgctgggggtg
accggctcgggtaaaacctttaccgtcgccaacgtgattgccgacctgcagcgcccgacc
atggtgctggcacccaacaaaaccctcgcggcacagctttacggcgagatgaaagagttc
ttcccggaaaacgcggtggagtatttcgtctcttactacgattactaccagccggaagcc
tacgttcccagctctgacacctttatcgaaaaagatgcctcggtgaacgaacacatcgaa
cagatgcgtctgtcggccaccaaagcgctgcttgagcggcgtgatgtggtggtggtcgcg
tcggtctcggccatctacggcctgggcgacccggatctgtacctgaagatgatgcttcac
ctcacggtggggatgattatcgaccagcgtgcgatcctgcgccgcctggcagagctgcag
tacacccgcaacgaccaggctttccagcgcggcacgttccgcgtgcgcggcgaggtgatt
gatatcttcccggcggaatcggacgacatggccctgcgcgtggagctgttcgacgaagag
gttgagcggctgtcgctgttcgacccgctgacggggcacattgaatcagtgatccaacgc
tttaccgtctaccctaaaacgcactacgtcacgccgcgcgagcgtatcgtgcaggcgatg
gaagatatcaaggccgaactggcagaccgccgtaaggtgctgctggcgaacaacaagctg
ctcgaagagcagcgtctaagccagcgaacccagtttgacctggagatgatgaacgagctg
ggctactgctccggcatcgaaaactactcgcgctacctctccgggcgcgggccgggcgaa
gcaccgccgacgctgtttgactaccttcctgcggatggcctgctggtgatcgacgaatcc
cacgtcaccatcccgcaaatcggcgggatgtatcgcggcgaccgcgcgcgtaaagagacg
ctggtggagtatggcttccgcctaccgtcggcgctggataaccgcccgatgaagtttgaa
gagtttgaggccctcgcgccgcaaaccatctacgtgtcggcaacgccgggcaactacgag
ctggaaaaatccggcgaggacgtggttgatcaggtggtgcgtccgaccgggctgctcgac
ccgattatcgaagtgcgtcctgtcgccacccaggtggacgatctgctctcggagatccgt
ctccgctccgctattaacgagcgcgtactggtcaccacgctgaccaaacgtatggccgaa
gacctgaccgaatatctggaagagcacggcgagaaggtgcggtatctgcactcggacatc
gataccgttgagcgtatggagatcatccgcgacctgcgccttggcgagtttgacgtgctg
gtggggatcaaccttctgcgagaaggcctggacatgccggaggtgtcgctggttgcgata
cttgacgccgacaaagagggcttcctgcgttctgaacgttcactcattcagaccattggc
cgtgccgcccgtaacgtcaacggtaaggccattctgtacggcgataagatcaccccgtca
atggcgaaagcgattggcgaaacggaacgtcgccgcgagaagcagcagcgctacaacgaa
gagcacggcatcacgcctcagggtctgaacaagaaagtggtggatattctggcgctgggt
cagaacattgcgaagaccaaaaccaaagggcgcgggaaagcccgtccagtggtggaggag
gataccgtcgcgctgacgccgaaagcgttgcagcagaagatccacgagctggaagggcag
atgatgcagcacgcgcagaatctggagttcgaggaggccgcgcaaatccgcgaccagctg
catcagctgagggatctgttcatcgcggcatcgtaa
DBGET
integrated database retrieval system
