KEGG   Equus caballus (horse): 100051616
Entry
100051616         CDS       T01058                                 
Symbol
TRIM42
Name
(RefSeq) tripartite motif-containing protein 42
  KO
K12018  tripartite motif-containing protein 42
Organism
ecb  Equus caballus (horse)
Brite
KEGG Orthology (KO) [BR:ecb00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ecb01009]
    100051616 (TRIM42)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ecb04121]
    100051616 (TRIM42)
Protein phosphatases and associated proteins [BR:ecb01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     100051616 (TRIM42)
Ubiquitin system [BR:ecb04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    100051616 (TRIM42)
SSDB
Motif
Pfam: zf-B_box fn3 Pur_ac_phosph_N CHDCT2
Other DBs
NCBI-GeneID: 100051616
NCBI-ProteinID: XP_001495056
Ensembl: ENSECAG00000008921
VGNC: 24511
LinkDB
Position
16:76579787..76602415
AA seq 724 aa
METAMCVCSPCCTWQRCCPRLCSCLCCKFLFTSERNCTCFPCPYKDERNCQCCHCTCSEN
PNCHWCCCSWANDPNCKCCCTANSNLKCYYYESRCCRNATITFRKGRLKSIRISSKTALR
VGTSDSQLDEVKTTPANSNLVDHLSCPMCGRLRLHSFMLPCHHSLCEKCLRQLQKHAEVT
ENFFILICPVCDRSHCMPYSHKMQLPENYLRGRLTKRYMQQHGYLKWRFDRSTGPILCQV
CRSRRIAYKRCLTCRLNLCNDCLKTFHSDVAMQDHVFVDTSTEDQDEKICIHHPSSRIIE
YCRSDNELLCTFCKTAFHNGHDTISLIDACSERSAALFSAIAKFKAVRYEIDNDLMEFNI
LKSSFKADKEVKRKEIRNGFLKLRSILQEKEKSIMEQIENLEVSRQKEIEKYVYVTTMKV
NEMDGLIAYSKEALKETGQVAFLQSAKILVDQIEDGIQSTYRPDPQLRLHSVHGMPLDFA
ELSSAIHELFPTGPKKVCSSGDSLPSPYPTHSEMMIARKVTFSTHSFGNQQIYQRSTSLL
SINTTSGEKAKTGLEVYGRAQSAAPAKPTDGLYTYWSAGVENQPVQNSSSFHNWYSCNDG
SVKTPGPIVIYQTLVYPRAAKVYWTCPTEDVDSFEMEFYELITSPPNNVRTELCGQIQDI
TQQNLELHNLTPNTEYLFKVRAINDNGPGQWSDICKVVTPDGRGKNRAKWGLLKNIQSAL
QKHF
NT seq 2175 nt   +upstreamnt  +downstreamnt
atggagactgccatgtgtgtttgctctccatgttgtacatggcagagatgttgtcctcga
ttatgctcctgtctatgctgcaagttcctcttcacctcggagcggaattgcacctgcttt
ccctgcccttacaaggatgagcggaactgccagtgctgccactgcacctgctccgagaat
cccaactgccactggtgctgctgctcctgggccaacgaccccaactgcaagtgctgctgc
acggccaacagcaacctcaagtgctactactacgagagccgctgctgccgcaatgccacc
atcacgttccgcaagggccgcctcaagagcatccgcatctcctccaagaccgccttgcgc
gtggggaccagcgattcccagctcgacgaggtgaagacgacgcccgccaacagtaacctg
gtggaccacctctcgtgccccatgtgcggccggctgcgcctgcactccttcatgctgccc
tgccaccacagcctgtgcgagaagtgcctgcggcagctgcagaagcacgccgaggtcacc
gagaacttcttcatcctcatctgccccgtgtgcgaccgctcgcactgcatgccctacagc
cacaagatgcagctgcccgagaactacctgcgcgggcgcctcaccaagcgctacatgcag
cagcacggctacctcaagtggcgcttcgaccgctccaccgggcccatcctctgccaggtc
tgccgcagccggcgcatcgcctacaagcgctgcctcacctgccgcctcaacctgtgcaac
gactgcctcaagaccttccactcggacgtggccatgcaggaccacgtcttcgtggacacc
agcacggaggaccaggacgagaagatctgcatccaccacccgtccagccgcatcatcgag
tactgccgcagcgacaacgagctgctctgcaccttctgcaagaccgccttccacaacggc
cacgacaccatcagcctcatcgacgcctgctccgagaggtccgccgcgctcttcagcgcc
atcgccaagttcaaagcagtccgatacgaaatcgataacgacctgatggaattcaacatt
ttaaaaagcagcttcaaagccgacaaggaggtaaagcgaaaagagatcagaaacggattt
ctcaagctgcgcagcatcctgcaggagaaagagaaatccatcatggagcagatagagaac
ctggaagtctccaggcagaaggagatcgaaaaatacgtgtacgtcacgaccatgaaagtg
aacgagatggacggcctgatcgcctactccaaggaggcgctgaaggagacgggccaggtg
gcgttcctgcagtccgccaagatcctggtggaccagatcgaggacggcatccagagcacc
tacaggcccgacccgcagctccgcctacactccgtgcacggcatgcccttggacttcgct
gagctctccagtgcgatccacgagctgttccccacgggacccaagaaggtctgctcctca
ggggactccctgccctccccctaccccacccactcggaaatgatgattgccaggaaggtc
acttttagcacccacagctttggcaaccagcagatataccagcgaagcacctccttgctg
tccatcaacaccaccagcggtgagaaagccaagacgggtttggaggtctatgggagagcc
cagtcggcagcacctgccaagcccaccgacggcctctacacctactggagcgccggggtg
gaaaaccagcctgtgcagaacagcagcagcttccacaactggtactcgtgcaacgatggc
tctgtgaagaccccaggcccgatcgtgatctaccagactctggtgtatccaagagctgcc
aaggtttattggacatgcccaacagaagacgtggactcttttgagatggaattctacgaa
ctcattacttcccctcccaacaacgtgcggacagagctctgtggacaaattcaagacata
acgcagcagaacctggagctgcacaacctgacccccaacaccgagtatctgtttaaagtt
cgagccatcaacgacaacggtcctgggcagtggagcgacatctgcaaggtggtaacacca
gatgggcgtgggaagaaccgagctaagtggggcctgctgaagaatatccagtctgccctc
cagaagcacttctga

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