Equus caballus (horse): 100071671
Help
Entry
100071671 CDS
T01058
Symbol
LIG3
Name
(RefSeq) DNA ligase 3 isoform X3
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
ecb
Equus caballus (horse)
Pathway
ecb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
100071671 (LIG3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecb03400
]
100071671 (LIG3)
Enzymes [BR:
ecb01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
100071671 (LIG3)
DNA repair and recombination proteins [BR:
ecb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
100071671 (LIG3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
zf-PARP
DNA_ligase_A_C
RNA_ligase
Synaptonemal_3
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
100071671
NCBI-ProteinID:
XP_014597354
Ensembl:
ENSECAG00000016416
VGNC:
19664
UniProt:
A0A3Q2IKK5
LinkDB
All DBs
Position
11:complement(38226160..38249076)
Genome browser
AA seq
954 aa
AA seq
DB search
MTLAFKILFPPVFRALSRREPCLFREHHWPDTRQFSQWSETDLLHGRCLLHRRKPFLSFQ
EGSLRPCATCFVSLPGSHVGLCSGPCEMAEQRFCVDYAKRGTAGCKKCKEKIVKGVCRIG
KVVPNPFSESGGDMKEWYHIKCMFEKLERARATTKKIEDITELEGWEELEDNEKEQISQH
IADLSSKAASTPKKKAVVQAKLTATGQVTSPVKGASFVTNTNPRKFSGFSAKPNNSGEAH
SRPTPKRSLSSSKCDPKHKDCLLREFRKLCAMVAENPSYNTKTQIIQDFLRKGSAGDGFH
GDVYLTVKLLLPGVIKSVYNLNDKQIVKLFSRIFNCNPDDMARDLEQGDVSETIRVFFEQ
SKSFPPAAKSLLTIQEVDEFLLQLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDL
KMNSGAKHVLDALDPNAYEAFKASRNLQDVVERVLRNEQEVEKEPGQRRALSVQASLMTP
VQPMLAEACKSIEYAMKKCPNGMFSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHKVAH
FKDYIPQAFPGGHSMILDSEVLLIDNKTGKPLPFGTLGVHKKAAFQDANVCLFVFDCIYF
NEVSLMDRPLCERRKFLHDNMVEIPNRIMFSEMKRVTKAADLADMINRVIREGLEGLVLK
DVKGTYEPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGGMMSIFLMGCYDPSS
QKWCTVTKCSGGHDDATLARLQKELDMVKISKDPSKIPSWLKINKIYYPDFIVPDPKKAA
VWEITGAEFSKSEAHTADGISIRFPRCTRIREDKDWKSATNLPQLKELYQLSKEKADFTV
VAGDEGSSTTGGSNGENEGTSGPAVSCKAPRASPKQPSTSAKKAGGKLSSPNSKGGSKPT
AKPSPVKGGQKLVTESSPLKTGEKRKAPDETPCQTKRPPPSEQRGRRAVPAGRR
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgactctggctttcaagatcctcttcccaccagtcttccgtgccctcagccgaagagaa
ccctgcctgttccgagaacatcactggcctgacacaagacagttcagccagtggtcagaa
acagacctgcttcatgggcgctgcctcctccacagaagaaagccatttctgtcattccag
gaaggcagtctaagaccgtgtgccacctgctttgtttccttgccagggtcgcatgtggga
ctctgcagtggcccctgtgagatggctgagcagcggttctgtgtggactatgccaagcgt
ggcacagctggctgcaaaaaatgcaaggaaaagattgtgaagggggtgtgccgcatcggc
aaagtagtgcccaatcccttctcggagtctgggggtgatatgaaagagtggtaccacatc
aaatgcatgtttgagaaactggagcgggcccgggccaccacaaaaaaaatcgaggacatc
acggagctggaaggctgggaagagctggaagataatgagaaggaacagataagccagcac
attgcagatctgtcttctaaggcagcaagcacaccaaagaagaaagctgttgtccaggct
aagctgacggccactggccaggtgacatctccagtgaaaggtgcctcgtttgtcaccaat
acgaatccccggaaattttctggcttttcagccaagcccaacaactctggggaagcccac
tcaagacctacccctaagagaagtctgtcctcaagcaagtgtgaccccaagcataaggac
tgtctgctgcgtgagtttcggaagttgtgtgccatggtggctgaaaatcccagctacaac
acaaagacccagatcatccaggacttccttcggaaaggctcggcaggagatggtttccat
ggtgacgtgtacctaacagtgaagctgctgctgccgggtgttattaaaagtgtttacaac
ttgaatgataagcagattgtgaagcttttcagccgcatttttaactgcaacccagatgac
atggcacgagacctagagcagggtgacgtgtcagagacaatcagagtcttctttgagcag
agcaagtctttccccccagctgccaagagcctccttactatccaggaggtggacgaattc
ctcctgcagctctccaagctcaccaaggaggatgagcagcaacaggccctgcaggacatc
gcctccaggtgtacagccaatgaccttaagtgcatcatcaggttgatcaaacatgatctg
aagatgaactcaggtgcaaaacacgtgttagatgcccttgaccccaatgcctatgaagcc
ttcaaagcctcacgcaacctgcaagacgtggtggagcgggtcctccgcaacgagcaggag
gtggagaaggagcccggccagagacgggctctgagtgtccaggcctcgctcatgaccccg
gtgcagcccatgctggcggaggcctgcaagtccatcgagtatgcgatgaagaagtgtcct
aatggcatgttctctgagatcaagtacgatggggagcgagtccaggtgcataagaacggg
gaccacttcagctacttcagccgcagtctcaagcctgtcctgcctcacaaggtggcccac
tttaaggactacatcccccaggcgttccctggaggccacagcatgatcttggactctgag
gtgctcctgattgacaacaagacaggcaaaccactgccctttgggactctgggagtgcac
aagaaagctgccttccaggatgctaatgtctgcctgtttgtttttgattgtatttacttc
aatgaggtcagcttgatggacaggcctctgtgtgagcggcggaagtttcttcatgataac
atggttgaaattcccaaccggatcatgttctcagaaatgaagagagtcacgaaagctgca
gacttggccgacatgataaaccgggtgatccgagaagggttggaagggctggtgctgaag
gacgtgaagggtacatatgagcctggaaagcggcattggctgaaagtgaagaaagactat
ttgaacgagggggccatggctgacacagctgacctggtggtccttggggccttctatggg
caagggagcaaaggtggcatgatgtccatcttcctcatgggctgctacgacccaagcagc
cagaagtggtgcacagtcaccaagtgttcaggaggccatgatgatgcaacgctcgcccgc
ctgcagaaggaactggacatggtgaagatcagcaaggatcccagcaagatacccagctgg
ctgaaaatcaataagatctactatcctgacttcatcgtcccagacccaaagaaagctgcc
gtgtgggagatcacaggggccgagttctccaaatctgaggctcacaccgccgatgggatc
tccatccgattccctcgctgcacccgaatccgtgaagataaggactggaaatctgccact
aacctcccccagctcaaggaactgtaccagctgtccaaggagaaggcggacttcactgta
gtggccggagatgaggggagctccaccacagggggcagcaatggagagaatgagggcacc
tcggggcctgctgtgtcgtgcaaggcccccagagcctcccccaagcagccctccactagt
gccaagaaggcgggagggaagctgagtagccccaacagcaaaggcggcagcaagcccact
gcaaagccatcccctgtgaaagggggacagaagctggtcacagagtcttctcccttgaaa
acgggggagaagcggaaggctcctgatgagaccccatgccaaacaaagaggccgccaccc
agcgagcagagaggaaggagagctgtgccagcaggcaggcgatag
DBGET
integrated database retrieval system
