Escherichia coli O6 K2 H1 CFT073 (UPEC): c5479
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Entry
c5479 CDS
T00106
Symbol
slt
Name
(GenBank) Soluble lytic murein transglycosylase precursor
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
ecc
Escherichia coli O6:K2:H1 CFT073 (UPEC)
Brite
KEGG Orthology (KO) [BR:
ecc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ecc01011
]
c5479 (slt)
Enzymes [BR:
ecc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
c5479 (slt)
Peptidoglycan biosynthesis and degradation proteins [BR:
ecc01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
c5479 (slt)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
Cucumo_coat
TPR_6
TPR_19
DHH_CID
Motif
Other DBs
NCBI-ProteinID:
AAN83899
UniProt:
A0A0H2VDU9
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Position
5220568..5222505
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AA seq
645 aa
AA seq
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MEKAKHVTWRLLAVGVCLLTVSSVARADSLDEQRSRYAQIKQAWDNRQMDVVEQMMPGLK
DYPLYPYLEYRQITDDLMNQPAVTVTNFVRANPTLPPARTLQSRFVNELARREDWRGLLA
FSPEKPGTTEAQCNYYYAKWNTGQSEEAWQGAKELWLTGKSQPNACDKLFSVWRASGKQD
PLAYLERIRLAMKAGNTGLVTVLAGQMPADYQTIASAIISLANNPNTVLTFARTTGATDF
TRQMAAVAFASVARQDAENARLMIPSLAQAQQLNEDQIQELRDIVAWRLMGNDVTDEQAK
WRDDAIMRSQSTSLIERRVRMALGTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLERG
REAEAKEILHQLMQQRGFYPMVAAQRIGEEYELKIDKAPQNVDSALTQGPEMARVRELMY
WNLDNTARSEWANLVKSKSKTEQAQLARYAFNNQWWDLSVQATIAGKLWDHLEERFPLAY
NDLFKRYTSGKEIPQSYAMAIARQESAWNPKVKSPVGASGLMQIMPGTATHTVKMFSIPG
YSSPGQLLDPETNINIGTSYLQYVYQQFGNNRIFSSAAYNAGPGRVRTWLGNSAGRIDAV
AFVESIPFSETRGYVKNVLAYDAYYRYFMGDKPTLMSATEWGRRY
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaaagccaaacacgttacctggcggctgttggctgtcggtgtctgtctgctgacg
gtcagcagcgtggcgcgagccgactcactggatgagcagcgtagccgttacgcgcaaatt
aagcaggcctgggataatcgacaaatggatgtggtcgaacaaatgatgcctggactgaaa
gattacccactttatccctacctggaataccgccagatcactgatgacctgatgaatcaa
ccggcggtgacggtcactaactttgttcgcgctaaccccacgcttcctcccgctcgcacg
ctgcaatctcgtttcgtcaatgaactggcgcggcgtgaagactggcgtggcttgttagcc
tttagcccggaaaagcccggaactaccgaagcgcaatgtaattactactatgcgaaatgg
aacaccgggcagagtgaagaagcctggcaaggggcgaaagagctgtggctaaccggcaag
agccagcctaacgcctgtgacaagttatttagcgtctggcgtgcgtcaggtaaacaagat
ccgctggcgtatttagagcgtatccgtctggcgatgaaagcgggtaacaccggcctggta
acagtgctggcagggcagatgcctgccgattaccagactatcgcctcggcaatcatttca
ctggcgaacaaccctaatacggtactgaccttcgcgcgtacaaccggagcgaccgatttt
acccgtcaaatggcggcggtggcgtttgccagtgtggcgcggcaggatgctgaaaatgca
cggctgatgatcccgtcgcttgcccaggcgcagcagcttaatgaagatcagattcaggag
ctgcgcgatatcgtcgcctggcgtttgatgggcaatgatgtcaccgatgagcaggcgaaa
tggcgcgatgacgccattatgcgttcgcaatctacttcgcttattgaacggcgcgtgcga
atggcgcttggcaccggcgatcgtcgcggcctgaatacctggctggcgcgtctgcctatg
gaagcgaaagagaaagatgaatggcgttactggcaggcggatttattgctggaacgcgga
cgtgaagctgaagcaaaagagattttgcatcaactcatgcaacagcgtggtttctacccg
atggttgctgcacaacgcatcggcgaagagtatgagctgaagattgataaagcgccgcag
aatgttgacagcgccctgactcaggggccggagatggcgcgcgtgcgcgagttgatgtac
tggaatctcgataacaccgcgcgtagcgagtgggccaatctggtgaagagcaagtcaaaa
acagagcaggctcaactggctcggtatgctttcaataaccaatggtgggatcttagcgtt
caggcaacgatcgccgggaagctttgggatcatctggaagagcgattcccgctggcttac
aacgatcttttcaaacgctacaccagtggtaaggagatcccgcaaagctatgcgatggcg
attgcccgtcaggagagtgcctggaatccgaaagtgaaatcaccggtaggggccagcggc
ctgatgcagattatgcctggtaccgcgacccatacggtgaagatgttctctattcccggt
tatagcagccctgggcaattgctggatccggaaacgaacatcaacattggcaccagttac
ctgcaatatgtttatcagcagtttggcaataaccgtattttctcctcagcagcttataac
gccggaccagggcgggtgcgaacctggcttggcaacagcgcagggcgtatcgacgcagtg
gcatttgtcgagagtattccattctccgagacgcgcggttatgtgaaaaacgtgctggct
tatgacgcttactaccgctatttcatgggggataaaccgacgttgatgagcgccacggaa
tggggacgtcgttactga
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