Escherichia coli K-12 DH10B: ECDH10B_0493
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Entry
ECDH10B_0493 CDS
T00666
Symbol
intD
Name
(GenBank) DLP12 prophage; predicted integrase
Organism
ecd
Escherichia coli K-12 DH10B
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Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
DUF6538
NPM1-C
TAL_FSA
Motif
Other DBs
NCBI-ProteinID:
ACB01661
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Position
complement(503370..504533)
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AA seq
387 aa
AA seq
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MSLFRRNEIWYASYSLPGGKRIKESLGTKDKRQAQELHDKRKAELWRVEKLGDLPDVTFE
EACLRWLEEKADKKSLDSDKSRIEFWLEHFEGIRLKDISEAKIYSAVSRMHNRKTKEIWK
QKVQAAIRKGKELPVYEPKPVSTQTKAKHLAMIKAILRAAERDWKWLEKAPVIKIPAVRN
KRVRWLEKEEAKRLIDECPEPLKSVVKFALATGLRKSNIINLEWQQIDMQRRVAWVNPEE
SKSNRAIGVALNDTACKVLRDQIGKHHKWVFVHTKAAKRADGTSTPAVRKMRIDSKTSWL
SACRRAGIEDFRFHDLRHTWASWLIQSGVPLSVLQEMGGWESIEMVRRYAHLAPNHLTEH
ARKIDDIFGDNVPNMSHSEIMEDIKKA
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgtcactcttccgcagaaatgaaatatggtatgcctcgtattcgctcccgggcgggaaa
cgaattaaggaatctcttggcacaaaggacaaacggcaagctcaggagttgcacgacaag
cgaaaagcagaactctggcgagtagaaaagctaggggatttacctgatgtcacttttgaa
gaggcctgcctaagatggcttgaggaaaaagctgataaaaaatctctcgattcagataaa
agccggattgagttctggcttgaacattttgagggtataaggcttaaagatatctcggag
gcaaagatttactctgctgtaagcagaatgcataacagaaagacgaaagaaatatggaaa
cagaaagttcaggccgccatcaggaaaggtaaagaactgcctgtttatgaaccaaagcca
gtatcaactcagacaaaggcaaagcatcttgccatgataaaggccattctccgtgctgca
gaacgcgactggaagtggctggaaaaagcgcctgtcatcaagataccagcggtcagaaac
aagcgagtcagatggctggaaaaggaggaagcaaaacgccttattgatgagtgccccgaa
ccactgaaatctgtcgtcaagtttgcgctggcaactggtctgagaaagtcgaacatcata
aatctggaatggcaacaaatcgacatgcagcgacgagttgcctgggtgaatccagaagag
agcaaatcaaaccgcgccattggtgtggcgctgaacgataccgcctgtaaagtgttgcgt
gatcaaataggcaagcatcacaaatgggtgtttgtacataccaaggcggctaagcgagca
gatggaacatcaacgcctgcggtcaggaagatgcgcatcgacagcaagacatcatggcta
tcagcttgtcgtcgtgcaggaattgaagatttccgtttccatgacctcagacacacctgg
gcaagctggctgattcagtcaggcgtcccattatcagtgcttcaggaaatgggcggatgg
gagtccatagaaatggttcgtaggtatgctcaccttgcgcctaatcatttgacagagcat
gcgaggaaaatagacgacatttttggtgataatgtcccaaatatgtcccactctgaaatt
atggaggatataaagaaggcgtaa
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