Escherichia coli O157 H7 EDL933 (EHEC): Z4230
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Entry
Z4230 CDS
T00044
Symbol
recJ
Name
(GenBank) ssDNA exonuclease, 5' --> 3' specific
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ece
Escherichia coli O157:H7 EDL933 (EHEC)
Pathway
ece03410
Base excision repair
ece03430
Mismatch repair
ece03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ece00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Z4230 (recJ)
03430 Mismatch repair
Z4230 (recJ)
03440 Homologous recombination
Z4230 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ece03400
]
Z4230 (recJ)
DNA repair and recombination proteins [BR:
ece03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Z4230 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Z4230 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Z4230 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
RecJ_OB
PEP-utilizers
Motif
Other DBs
NCBI-ProteinID:
AAG58020
UniProt:
A0A9Q6ZK54
LinkDB
All DBs
Position
complement(3841830..3843563)
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AA seq
577 aa
AA seq
DB search
MKQQIQLRRREVDETADLPAELPPLLRRLYASRGVRSAQELERSVKGMLPWQQLSGVEKA
VEILYNAFREGTRIIVVGDFDADGATSTALSVLAMRSLGCSNIDYLVPNRFEDGYGLSPE
VVDQAHARGAQLIVTVDNGISSHAGVEHARSLGIPVIVTDHHLPGDTLPAAEAIINPNLR
DCNFPSKSLAGVGVAFYLMLALRTFLRDQGWFDERGIAIPNLAELLDLVALGTVADVVPL
DANNRILTWQGMSRIRAGKCRPGIKALLEVANRDAQKLAASDLGFALGPRLNAAGRLDDM
SVGVALLLCDNIGEARVLANELDALNQTRKEIEQGMQIEALTLCEKLERSRDTLPGGLAM
YHPEWHQGVVGILASRIKERFHRPVIAFAPAGDGTLKGSGRSIQGLHMRDALERLDTLYP
GMMLKFGGHAMAAGLSLEEDKFELFQQRFGELVTEWLDPSLLQGEVVSDGPLSPAEMTME
VAQLLRDAGPWGQMFPEPLFDGHFRLLQQRLVGERHLKVMVEPVGGGPLLDGIAFNVDTA
LWPDNGVREVQLAYKLDINEFRGNRSLQIIIDNIWPI
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacaacagatacaacttcgtcgccgtgaagtcgatgaaacggcagacttgcccgcg
gaattgcctcccttgctgcgccgtttatacgccagccggggagtacgcagtgcgcaagaa
ctggaacgcagtgttaaaggtatgctgccctggcagcaactgagcggcgtcgaaaaggcc
gttgagatcctttacaacgcttttcgcgaaggaacgcggattattgtggtcggtgatttc
gacgccgacggtgccaccagcacggctctaagcgtgctggcgatgcgctcgcttggttgc
agcaatatcgactacctggtaccaaaccgtttcgaagacggttacggcttaagcccggaa
gtggtcgatcaggcccatgcccgtggcgcgcagttaattgtcacggtggataacggtatt
tcctcccatgcgggagttgagcacgctcgctcgttgggcatcccggttattgttaccgat
caccatttgccgggcgacacattacccgcagcggaagcgatcattaaccctaacttgcgc
gactgtaatttcccgtcgaaatcactggcaggcgtgggtgtggcgttttatctgatgctg
gcgctgcgcacctttttgcgcgatcagggctggtttgatgagcgcggcatcgcaattcct
aacctggcagaactgctggatctggtcgcgctggggacagtggcggacgtcgtgccgctg
gacgctaataatcgcattctgacctggcaggggatgagtcgcatccgtgccggaaagtgc
cgtccagggattaaagcgctgctggaagtggcaaaccgtgatgcacaaaaactcgccgcc
agcgatttaggttttgcgctggggccacgtctcaatgctgccgggcgactggacgatatg
tccgtcggtgtggcgctgttgctgtgcgacaacatcggcgaagcgcgcgtgctggcaaat
gaactcgatgcgctaaatcagacgcgaaaagagatcgaacaaggaatgcagattgaagcc
ttgaccctgtgcgagaaactggagcgaagtcgcgacacgctacccggcgggctggcaatg
tatcaccccgaatggcatcagggcgttgtcggtattctggcttcgcgcatcaaagagcgt
tttcaccgtccggttatcgcctttgcgccagcaggtgatggtacgctgaaaggttccggt
cgctccattcaggggctgcatatgcgtgatgcgctggagcgattagacacactctacccc
ggtatgatgctgaagtttggcggtcatgcgatggcggcgggtttgtcgctggaagaggat
aaattcgaactctttcaacaacggtttggcgagttggttaccgagtggctggacccttcg
ctattgcaaggcgaagtggtgtcagacggcccgttaagcccggccgaaatgaccatggaa
gtggcgcagctgctgcgcgatgctggcccgtgggggcagatgttcccggagccgctgttt
gatggtcatttccgtctgctgcaacagcggctggtgggcgaacgtcatttgaaagtcatg
gtcgaaccggtcggcggcggtccgctgctggatggtattgcttttaatgtcgataccgcc
ctctggccggataacggcgtgcgcgaagtgcaactggcttacaagctcgatatcaacgag
tttcgcggcaaccgcagcctgcaaattatcatcgacaatatctggccaatttag
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