Escherichia coli O157 H7 EC4115 (EHEC): ECH74115_4085
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Entry
ECH74115_4085 CDS
T00778
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V, beta subunit
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
ecf
Escherichia coli O157:H7 EC4115 (EHEC)
Pathway
ecf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ecf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ECH74115_4085 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecf03400
]
ECH74115_4085 (recB)
Enzymes [BR:
ecf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ECH74115_4085 (recB)
DNA repair and recombination proteins [BR:
ecf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ECH74115_4085 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
BscB_a-b
Cas_Cas2CT1978
AAA_25
Motif
Other DBs
NCBI-ProteinID:
ACI37031
LinkDB
All DBs
Position
complement(3779258..3782800)
Genome browser
AA seq
1180 aa
AA seq
DB search
MSDVAETLDPLRLPFQGERLIEASAGTGKTFTIAALYLRLLLGLGGSAAFPRPLTVEELL
VVTFTEAATAELRGRIRSNIHELRIACLRETTDNPLYERLLEEIDDKAQAAKWLLLAERQ
MDEAAVFTIHGFCQRMLNLNAFESGMLFEQQLIEDESLLRYQACADFWRRHCYPLPREIA
QVVFETWKGPQALLRDINRYLQGEAPVIKAPPPDDETLASRHAQIVARIDTVKQQWRDAV
GELDALIESSGIDRRKFNRSNQAKWIDKISAWAEEERNSYQLPESLEKFSQRFLEDRTKA
GGETPRHPLFEAIDQLLAEPLSIRDLVITRALAEIRETVAREKRRRGELGFDDMLSRLDS
ALRSESGEVLAAAIRTRFPVAMIDEFQDTDPQQYRIFRRIWHHQPETALLLIGDPKQAIY
AFRGADIFTYMKARSEVHAHYTLDTNWRSAPGMVNSVNKLFSQTDDAFMFREIPFIPVKS
AGKNQALRFVFKGETQPAMKMWLMEGESCGVGDYQSTMAQVSAAQIRDWLQAGQRGEALL
MNGDDARPVRASDISVLVRSRQEAAQVRDALTLLEIPSVYLSNRDSVFETLEAQEMLWLL
QAVMTPERENTLRSALATSMMGLNALDIETLNNDEHAWDAVVEEFDGYRQIWRKRGVMPM
MRALMSARNIAENLLATAGGERRLTDILHISELLQEAGTQLESEHALVRWLSQHILEPDS
NASSQQMRLESDKHLVQIVTIHKSKGLEYPLVWLPFITNFRVQDQAFYHDRHSFEAVLDL
NAAPESVDLAEVERLAEDLRLLYVALTRSVWHCSLGVAPLVRRRGDKKGDTDVHQSALGR
LLQKGEPQDAAGLRTCIEALCDDDIAWQTAQTGDNQPWQVNDALTAELNARTLQRLPGDN
WRVTSYSGLQQRGHGIAQDLMPRLDVDAAGVVSVVEEPTLTPHQFPRGASPGTFLHSLFE
DLNFTQPVDPNWVQEKLELGGFESQWEPVLTEWITAVLQAPLNETGVSLSQLSDRDKQVE
MEFYLPISEPLIASQLDALIRQFDPLSAGCPPLEFMQARGMLKGFIDLVFRHEGRYYLLD
YKSNWLGEDSSAYTQQAMAAAMQAHRYDLQYQLYTLALHRYLRHRIADYDYERHFGGVIY
LFLRGVDKEHPQQGIYTTRPNAGLIDLMDEMFAGMTLEEA
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatgtcgccgagacactagatcctttgcgcttgccctttcagggcgagcgcctg
attgaagcctctgccggcacaggcaaaacctttacgattgcggcgctctatttgcgcctg
ttacttggactaggcggttccgccgcctttccccgcccgctgaccgttgaagaactgctg
gtggtcacctttaccgaggctgccacggcagaattgcgtggtcgtatccgtagcaatatc
catgagttgcgcatcgcctgtctgcgtgaaaccaccgacaatccactgtacgaacgtctg
ctggaagagatcgacgataaagcgcaagccgcgaagtggttgttgttagccgaacggcag
atggatgaagcggcagtctttactattcacggtttttgccagcgcatgctcaacctgaat
gcctttgaatccggcatgctgtttgagcagcagctgattgaagatgagtctctgctacgt
taccaggcctgcgccgatttctggcgtcgccactgctacccgctgccgcgtgaaatagcc
caggtcgtctttgaaacctggaaagggccgcaggcgttgctgcgcgatattaatcgttat
ctgcaaggtgaagcgccggttatcaaagcaccgccgcccgatgatgaaacgctggcttcc
cgtcacgcgcaaattgtggcgcgtattgatacggtaaaacagcagtggcgcgacgcagtg
ggtgaactggatgcgctgatcgaatcttctggtattgatcgacgcaagtttaaccgtagc
aatcaggctaaatggatcgacaagatcagcgcctgggcagaagaagagagaaacagttat
cagttgccggagtcgctggaaaaattctcccagcgtttcttagaagatcgcacgaaggcc
gggggggaaaccccgcgacatccactgtttgaggcgatcgatcaactgcttgcagaacca
ttgtcgatccgcgatctggtgatcacccgcgcattggctgagatccgcgaaacagtagcg
cgtgaaaaacgccgccgtggcgaattgggttttgatgacatgttaagtcggctcgattcc
gcgctgcgtagcgaaagcggtgaggtgttggcagcggcgatccgtacgcgattcccggtg
gcaatgatcgatgaatttcaggataccgacccccagcagtaccgaatttttcgccgtatc
tggcaccatcagccggaaaccgcattgttgctgattggcgacccgaagcaggccatatat
gcattccggggtgcggatatcttcacttatatgaaggcgcgtagtgaagttcacgcccac
tacactttagacaccaactggcgctccgcacctggaatggtgaacagtgtgaacaagctt
ttcagccagactgatgacgcgttcatgtttcgcgaaataccgtttattccagtgaaatca
gccgggaaaaatcaggcgttacgttttgtctttaaaggtgaaacgcagcctgcgatgaaa
atgtggctgatggaaggcgaaagttgcggcgttggcgactatcaaagtaccatggcgcag
gtaagtgctgcgcaaattcgcgactggctacaagccggacagcggggcgaagcgttgctg
atgaacggcgacgacgcgcgtccggtgcgtgcttcggacatcagtgtgctggtgcgcagc
cgccaggaggccgcccaggtgcgcgatgccttaacgttgctggaaatcccttccgtttac
ctttcgaaccgcgacagtgtttttgaaactctggaagcgcaggaaatgctttggttgttg
caggcggtgatgacgcccgaacgtgagaacaccctgcgtagtgcgctggcaacgtcaatg
atggggctgaacgcgctggatatcgaaacgctgaataatgacgaacatgcgtgggacgcg
gtggtcgaagagttcgatggttatcggcaaatctggcgcaaacgtggcgttatgccgatg
atgcgggcgctgatgtcggcgcgtaacattgcagaaaacttgctggcaacggcaggcggt
gagcggcgtcttaccgatatcttgcatatcagcgaactgctacaagaagccggaacgcag
ctggaaagtgaacatgcgctggtacgctggttatcgcaacatatcctcgagccagacagt
aatgcctccagccaacaaatgcgcctcgaaagtgataaacatctggtacagattgtcacg
atccataaatcaaaagggctggaatatccgctggtctggttgccatttattaccaatttc
cgcgtccaggatcaggcgttttatcacgatcgccactcgtttgaggctgttctggatctt
aacgctgcgccagaaagcgtcgatcttgcggaggtcgaacgtctggcggaagatctgcgt
ttgctttacgtggcgctgacgcgttcggtttggcattgcagtctcggcgttgcaccgctg
gtgcgccgtcgtggcgataaaaaaggtgacaccgacgtccaccaaagtgccctcgggcgt
ttgctgcaaaaaggggaaccgcaagatgcggcagggcttcgcacctgtattgaagcgtta
tgcgatgatgatattgcctggcaaacggcacaaactggtgataaccagccctggcaggtt
aatgatgctttaactgcagaactgaatgcgaggacgctacaacgattgcccggcgataac
tggcgtgtcaccagctactccggcttgcagcagcgtggtcacggtatcgctcaggatctg
atgccacggctggatgttgatgccgcaggcgtggtcagcgtcgttgaagaaccgacgtta
acaccgcatcagttcccgcgcggtgcgtcaccggggacattcttgcacagtttgtttgaa
gacctcaattttacccagccggttgacccgaactgggtacaggaaaaactggaactcggc
ggctttgaatcgcagtgggaaccggtgttgaccgagtggatcacggctgtcctccaggca
cctctcaatgaaacgggtgttagcctgagtcagctttccgaccgcgataaacaggtggag
atggagttttacctgccgattagcgaaccgctcatcgccagccagcttgatgcactaatt
cgccagtttgacccgctatccgctggctgcccgccgctggagttcatgcaggcacgtggc
atgttaaaaggctttatcgacctggtgttccgccacgaagggcgttattacctgctcgac
tataaatccaactggttgggtgaagatagttcggcttacacccaacaggctatggcagcg
gcaatgcaggcacaccgctatgatctgcaatatcagctttataccctggcgctgcaccgt
tatctgcgccatcgcattgctgattacgactatgagcgccactttggcggcgttatttat
ctgttcctgcgtggtgttgataaagaacatccgcaacaagggatttacacaacccgcccc
aacgccgggttgattgacctgatggatgagatgtttgccggtatgactctggaggaggcg
taa
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