Escherichia coli K-12 W3110: JW0244
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Entry
JW0244 CDS
T00068
Symbol
perR
Name
(GenBank) predicted DNA-binding transcriptional regulator
KO
K03566
LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Organism
ecj
Escherichia coli K-12 W3110
Pathway
ecj02026
Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:
ecj00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02026 Biofilm formation - Escherichia coli
JW0244 (perR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecj03000
]
JW0244 (perR)
Transcription factors [BR:
ecj03000
]
Prokaryotic type
Helix-turn-helix
LysR family
JW0244 (perR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_5
Motif
Other DBs
NCBI-ProteinID:
BAA77924
UniProt:
Q57083
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Position
complement(268513..269406)
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AA seq
297 aa
AA seq
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MKLLAKAPLNLLRAFEAAGRTGAFALAASELELSPSAISHAIRKLENLLDVRLFQRSTRE
ITLTKEGEILLEHIQRGFNELQQGLALVTADESRPLRLHTAPSFAHQWLLPRLGKFIREN
PSIDLRLSASTEYARFEQDDFDLDIVYGEPRPSPYEKIPLAVEELTPLCSPQLAERLKKP
EDLYALTLIQCDVQLYQWKGWFEANKMTPPNNYGLRFDRSFMAIAAAVDGLGVVLESKLL
AEREIASGKLVCPLVNSTSEIHYIGHYLVFPQHQHMHSALDVFKTWLLNELNLGKIR
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcttagcaaaagcacctctaaatctgttacgcgcctttgaagcggctggtcgt
accggagcttttgcgttggccgcctctgagttggaactgtcacccagtgcgatcagccat
gccatccgcaaactggaaaacttgcttgatgtacgcctttttcagcgcagtacgcgagaa
attacgctgacgaaagaaggtgaaatactgcttgagcacatacagcggggatttaacgaa
ttacagcaggggttggcattagtgacggctgatgaatccaggcctttgcgccttcatact
gcaccgagttttgcccatcaatggcttttaccacgtcttggtaagttcatacgtgagaac
ccaagcatcgatctgcgactttcagccagcacagaatatgcacgttttgaacaggatgat
tttgatctcgatatagtctacggtgaaccccgcccatcaccctatgagaagatcccgctt
gctgttgaagaacttacgccactgtgttctccccaactggctgagcggctaaagaaacca
gaggatctctatgcgttgacattgattcagtgcgatgtgcagttgtaccagtggaaagga
tggtttgaggcgaataagatgacgccacccaataattatggccttcgatttgaccgtagc
tttatggcgattgctgccgcagttgacggcttgggagttgtgcttgaatcaaaactactg
gctgaacgtgaaatcgctagcggtaaactggtatgcccacttgtaaacagtaccagcgaa
atacattacatcggtcattatttggttttcccccagcaccaacacatgcattctgcgctt
gatgtgttcaaaacctggctactgaatgaactcaatctgggtaaaattcgttga
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