KEGG   Escherichia coli K-12 W3110: JW5908
Entry
JW5908            CDS       T00068                                 
Symbol
yddM
Name
(GenBank) predicted DNA-binding transcriptional regulator
  KO
K21498  antitoxin HigA-1
Organism
ecj  Escherichia coli K-12 W3110
Brite
KEGG Orthology (KO) [BR:ecj00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ecj02048]
    JW5908 (yddM)
Prokaryotic defense system [BR:ecj02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   HigB-HigA
    JW5908 (yddM)
SSDB
Motif
Pfam: HTH_3 HTH_31 HTH_26 Sigma54_DBD Xre-like-HTH HTH_IclR HTH_38
Other DBs
NCBI-ProteinID: BAE76451
UniProt: P67699
LinkDB
Position
complement(1554112..1554474)
AA seq 120 aa
MDYCCVGRNNNDSVPSEGTLLRVKTLMKMANHPRPGDIIQESLDELNVSLREFARAMEIA
PSTASRLLTGKAALTPEMAIKLSVVIGSSPQMWLNLQNAWSLAEAEKTVDVSRLRRLVTQ
NT seq 363 nt   +upstreamnt  +downstreamnt
atggattattgttgcgtaggaaggaacaataatgatagtgttcccagtgaaggaacgcta
ctgagagtaaagacactaatgaaaatggccaatcatccccgcccgggggacattattcag
gaatcactggacgaacttaatgtcagcctgcgcgagtttgccagagcaatggaaattgct
ccctcaacggcaagccgattgctgacaggaaaagcagctttgacgccagaaatggcgatt
aaactttccgtggtgatcggcagttcgccgcaaatgtggctgaatctgcaaaacgcctgg
agtctggcagaggcagaaaaaacagtggatgtgtcgcgattacgccgtctggttacgcaa
taa

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