Escherichia coli ATCC 8739: EcolC_3236
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Entry
EcolC_3236 CDS
T00697
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ecl
Escherichia coli ATCC 8739
Brite
KEGG Orthology (KO) [BR:
ecl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecl03400
]
EcolC_3236
DNA repair and recombination proteins [BR:
ecl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EcolC_3236
Archaeal homologous recombinant proteins
EcolC_3236
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
AAA_21
ABC_tran
cobW
AAA_15
nSTAND3
RsgA_GTPase
NTPase_1
AAA_22
AAA_14
GTP_EFTU
Motif
Other DBs
NCBI-ProteinID:
ACA78858
LinkDB
All DBs
Position
3543893..3547036
Genome browser
AA seq
1047 aa
AA seq
DB search
MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR
LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA
DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE
IYGQISAMVFEQHKSARTELEKLQAQASGVALLTPEQVQSLTASLQVLTDEEKQLLTAQQ
QEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA
EHSAALAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQ
WNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAE
QRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADV
KTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVK
KLGEEGAALRGQLDALTKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPQDDIQP
WLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQQLLTALAGYALTLPQE
DEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDDLPHSEETVALDNWR
QVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLT
QLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDGLALTVTVEQIQQELAQTHQKLRE
NTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQG
LTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSL
ALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMK
ERIPVQIKVKKINGLGYSKLESTFAVK
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctcagcctgcgcctgaaaaacctgaactcattaaaaggcgaatggaagatt
gatttcacccgcgagccgttcgccagcaacgggctgtttgctattaccggcccaacaggt
gcggggaaaaccaccctgctggacgccatttgtctggcgctgtatcacgaaactccgcgt
ctctctaacgtttcacaatcgcaaaatgatctcatgacccgcgataccgccgaatgtctg
gcggaggtggagtttgaagtgaaaggtgaagcgtaccgtgcattctggagccagaatcgg
gcgcgtaaccaacccgacggtaatttgcaggtgccacgcgtagagctggcgcgctgcgcc
gacggcaaaattctcgccgacaaagtgaaagataagctggaactgacagcgacgttaacc
gggctggattacgggcgcttcacccgttcgatgctgctttcgcaggggcaatttgctgcc
ttcctgaatgccaaacccaaagaacgcgcggaattgctcgaggagttaaccggcactgaa
atctacgggcaaatctcggcgatggtttttgagcagcacaaatcggcccgcacagagctg
gagaagctgcaagcgcaggccagcggcgtcgcgttgctcacgccggaacaagtgcaatcg
ctgacagcgagtttgcaggtacttactgacgaagaaaaacagttacttaccgcgcagcag
caagaacaacaatcactaaactggttaacgcgtctggacgaattgcagcaagaagccagc
cgccgtcagcaggccttgcaacaggcgttagccgaagaagaaaaagcgcaacctcaactg
gcggcgctcagtctggcacaaccggcacgaaatctacgcccgcactgggaacgcatcgca
gaacacagcgcggcgctggcgcatactcgccagcagattgaagaagtaaatactcgctta
cagagcacaatggcgcttcgcgcgagcattcgccaccacgcggcgaagcagtcagcagaa
ttacagcagcagcaacaaagcctgaatacctggttacaggaacacgaccgcttccgtcag
tggaacaacgaactggcgggttggcgtgcgcagttctcccaacaaaccagcgatcgcgag
catctgcggcaatggcagcaacagttaacccatgctgagcaaaaacttaatgcgcttgcg
gcgatcacgttgacgttaaccgccgatgaagttgctaccgccctggcgcaacatgctgag
caacgcccactgcgtcagcacctggtcgcgctacatggacagattgttccccaacaaaaa
cgtctggcgcagttacaggtcgctatccagaatgtcacgcaagaacagacgcaacgtaac
gccgcacttaacgaaatgcgccagcgttataaagaaaagacgcagcaacttgccgatgtg
aaaaccatttgcgagcaggaagcgcgcatcaaaacgctggaagctcaacgtgcacagtta
caggcgggtcagccttgtccactttgtggttccaccagccacccggcggtcgaggcgtat
caggcgctggagcctggtgttaatcagtctcgattactggcgctggaaaacgaagttaaa
aagctcggcgaagaaggtgcggcgctgcgcgggcaactggacgccttaacaaagcagctt
cagcgcgatgaaaacgaagcgcaaagcctccgacaagatgagcaagcacttactcaacaa
tggcaagccgtcacggccagcctcaatatcaccttgcagccacaggacgatattcaaccg
tggctggatgcacaagatgagcacgaacgccagctgcggttactcagccaacgacatgaa
ttacaagggcagattgccgcgcataatcagcaaattatccagtatcaacagcaaattgaa
caacgccagcagcagctcttaacggcattggcgggttatgcactgacattgccacaggaa
gatgaagaagagagctggttggcgacacgtcagcaagaagcgcagagctggcagcaacgc
cagaacgaattaaccgcgctgcaaaaccgtattcagcagctgacgccgattctggaaacg
ttgccgcaaagtgatgatctcccgcacagcgaagaaactgtggcgctggataactggcgg
caggttcatgaacaatgtctcgcattacacagccagcagcagacgttacagcaacaggat
gttctggcggcgcaaagtctgcaaaaagcccaggcgcagtttgacaccgcgctacaggcc
agcgtctttgacgatcagcaggcgttccttgcggcgctaatggatgaacaaacactaacg
cagctggaacagctcaagcagaatctggaaaaccagcgccgtcaggcgcaaacgctggtc
actcagacagcagaaacgctggcacagcatcaacaacaccgacctgacgggttggctctc
actgtgacggtggagcagattcagcaagagttagcgcaaactcaccaaaagttgcgtgaa
aacaccacgagtcaaggcgagattcgccagcagctgaagcaggatgcagataaccgtcag
caacaacaaaccttaatgcagcaaattgctcaaatgacgcagcaggttgaggactgggga
tatctgaattcgctaataggttccaaagagggcgataaattccgcaagtttgcccagggg
ctgacgctggataatttagtccatctcgctaatcagcaacttacccggctgcacgggcgc
tatctgttacagcgcaaagccagcgaggcgctggaagtcgaggttgttgatacctggcag
gcagatgcggtacgcgatacccgtaccctttccggcggcgaaagtttcctcgttagtctg
gcgctggcgctggcgctttcggatctggtcagccataaaacacgtattgactcgctgttc
cttgatgaaggttttggcacgctggatagcgaaacgctggataccgcccttgatgcgctg
gatgccctgaacgccagtggcaaaaccatcggtgtgattagccacgtagaagcgatgaaa
gagcgtattccggtgcagatcaaagtgaaaaagatcaacggcctgggctacagcaaactg
gaaagtacgtttgcagtgaaataa
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integrated database retrieval system
