Enterobacter hormaechei subsp. hormaechei: LI64_10550
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Entry
LI64_10550 CDS
T03709
Name
(GenBank) ATP-dependent helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
eclz
Enterobacter hormaechei subsp. hormaechei
Brite
KEGG Orthology (KO) [BR:
eclz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eclz03019
]
LI64_10550
Enzymes [BR:
eclz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
LI64_10550
Messenger RNA biogenesis [BR:
eclz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LI64_10550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
AAA_19
T2SSE
nSTAND3
NACHT
ResIII
AAA_16
NTPase_1
PhoH
SLFN-g3_helicase
AAA_23
Motif
Other DBs
NCBI-ProteinID:
AJB70960
LinkDB
All DBs
Position
2169300..2173202
Genome browser
AA seq
1300 aa
AA seq
DB search
MTEQPKLTFPMLMQKLDSLMLRDRQRFARRLHGVKKVKNPDAQQAIYQEMAKEIEQAAGK
VVLREAARPAITYPENLPVSQKKQDILEAVRDHQVVIVAGETGSGKTTQLPKICMELGRG
VKGLIGHTQPRRLAARTVANRIADELQTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLA
EIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSKH
FNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELGNESAGDILIFMSGE
REIRDTADALSKRDLRHTEILPLYARLSNSEQNRVFQPHSGRRIVLATNVAETSLTVPGI
KYVIDPGTARISRYSYRTKVQRLPIEPVSQASANQRKGRCGRVSEGICIRLYSEDDFLSR
PEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDAQ
ATAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQA
SDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNQFRRQCRVDFLNYLRVREWQDIYTQ
LRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGL
FKKPPKWTMVAELVETSRLWGRIAARIDPEWVEPVAQHLLKRSYSEPHWERGQGAVMATE
KVTVYGLPVVAARKVNYSQIDPALSRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELE
HKSRRRDILVDDETLFDFYDQRISHDVISARHFDSWWKKVSKETPDLLNFEKNMLIKEGA
ESVSKLDYPNFWHQGNLKLRLTYQFEPGADADGVTVHIPLPLLNQVDESGFEWQIPGLRR
ELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVTPLELSLLDALEREFRRMTGTTIDREDW
NWDQVPDHLKITFRVVDDKNKKLLEGRSLTALKEALKGKVQETLSAVADDGIEQSGLHIW
SFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPQEQQQMMWRGLRRLLLLNIPS
PIKYLHEKLPNKAKLGLYFNPYGKVLDLIDDCISCGVDKLIHEAGGPVWSEEGFAQLHEK
VRAELNDTVVEIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDVKAQMAGLVYRGFVTG
NGFKRLGDTLRYLQAIEKRLEKMAVDPHRDRAQMLKVENVQQAWQQWLNKLPPARRDDDD
VREIRWMIEELRVSFFAQQLGTPYPISDKRILQAMEQISA
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atgacagaacaaccaaaattgaccttcccgatgctgatgcaaaagcttgattcgctgatg
ctgcgcgacagacagcggtttgcgcgccgtctgcacggcgtgaagaaggttaaaaatcct
gatgcacaacaggccatttaccaggagatggccaaagagattgaacaggcggcagggaaa
gttgtgctgcgagaagccgcacgcccggcgattacctacccggaaaacctgcccgtcagc
cagaaaaagcaggacattcttgaagccgtgcgcgaccaccaggtggtgatcgttgcaggg
gaaaccggttcaggtaaaaccacccagctaccgaaaatctgcatggagctgggccgcggg
gtgaaagggctgatcggccacacccagccgcgtcgtctggcggcgcgtaccgtggcgaac
cgtattgccgacgagctgcaaacggagccgggcggctgcatcggttacaaggtgcgtttc
agcgatcacgtcagcgacaacaccatggttaagctgatgaccgacggtattctgctggcg
gaaatccagcaggatcgtctgctgatgcagtacgacaccattatcatcgatgaagcgcac
gagcgcagcctgaacatcgacttcctgctcggctacctgaaagagcttttgccgcggcgt
ccggatctgaaaatcatcatcacctccgcgaccatcgacccggaacgcttctcaaaacat
ttcaacaatgcgccgatcattgaagtttcaggccgaacctacccggttgaagtgcgctat
cgcccgattgtggaagaggcggacgataccgagcgcgaccagcttcaggccatcttcgat
gccgtcgacgaactgggcaacgagagtgctggcgacattctgatcttcatgagcggcgag
cgcgagatccgcgataccgccgatgcgctcagcaagcgcgatctgcgccacaccgagatc
ctgccgctgtacgcgcgcctgtcgaacagcgagcagaaccgcgtgttccagccgcacagc
gggcgccgcattgtgctggcgaccaacgtggccgaaacctcgctgaccgtaccgggcatt
aaatatgtgattgacccgggtacggcgcgcatcagccgctacagctaccgcaccaaagtt
cagcgcctgccgatcgagccggtttcccaggcgtcggctaatcagcgtaagggtcgctgc
ggccgcgtgtcggaagggatctgcattcgtctctattcggaagacgatttcctgtcgcgc
ccggagtttaccgacccggaaattctgcgcaccaacctggcatccgttatcctgcaaatg
accgcgctggggctgggcgatatcgccgccttcccgtttgtggaagcgccggacaaacgc
aatatccaggacggggtgcgcctgctggaagagctgggggccatcaccaccgacgcgcag
gcgacggcctataagcttacgccattgggccgccagctaagccaattgccggtcgatccg
cgtctggcgcgcatggtgctggaggcgcaaaagcacggctgcgtgcgtgaggcgatgatc
atcacctcggcgctctccattcaggatccgcgcgagcgcccgatggacaaacagcaggcg
tcggatgaaaaacaccgccgcttccacgataaagagtccgatttccttgcctttgtgaac
ctgtggaactacctcggcgagcagcaaaaagcgctctcgtcgaaccagttccgccgtcag
tgccgggtggatttcctcaactacctgcgcgtgcgcgagtggcaggatatctacacccag
ctgcgtcaggtggtgaaagagctgggcattccggtgaacagcgaaccggcggagtatcgc
gaaattcatatcgccttgctgaccggcctgctgtcccatatcgggatgaaggatgcggat
aagcaggaatataccggcgcgcgtaatgcgcgtttctccatcttcccgggttccggcttg
ttcaaaaagccgccgaagtggaccatggtcgccgagctggtggaaaccagccgcctgtgg
ggacgcattgccgcgcgtattgaccccgaatgggttgaaccggtggcgcagcacctgctg
aaacgctcgtacagcgagccgcactgggagcgcggtcagggcgcggtgatggcgacggaa
aaagtcaccgtctacggcctgccggtggttgctgcgcgtaaggttaactacagccagata
gacccggcgctcagccgcgagctgtttatccgccacgcgctggtggaaggtgactggcag
acgcgccacgccttcttccgtgaaaacctgaagctgcgcgctgaagtggaagagcttgag
cacaagtcccgccgtcgcgacattctggtggacgacgagacgctgtttgatttttacgac
cagcgcatcagccatgatgtgatctccgcgcgccatttcgacagctggtggaagaaagtc
agtaaagagaccccggacctgctcaacttcgaaaagaacatgttgattaaagagggtgcg
gagtcggtcagtaagctcgactacccgaacttctggcatcagggcaacctcaagctgcgt
ctgacctatcagtttgagccgggcgcggatgccgatggtgtgacggtgcacattccgctg
ccactgctaaaccaggtggatgagagcgggtttgagtggcagatccctggcctgcgccgc
gagctggttattgcattaatcaaatccctgcctaaaccggtgcggcgtaactttgtgcca
gcgccgaactacgccgaagcgttcctaggccgcgtcacgccgctggagctgtcgctgctg
gatgcgcttgagcgggagttccgacgcatgaccggcaccaccattgaccgcgaagactgg
aactgggatcaggtgcccgatcacctgaaaatcacattccgcgtggtggacgataaaaac
aaaaagctgcttgagggccgctctctgacggcgctgaaagaggcgctgaaaggtaaagtc
caggagacgctttctgcggtggcggacgacggcattgagcagagcgggctgcatatctgg
agctttggtcagcttcccgaaagctacgagcagaagcgcggcaactataaggtcaaagcc
tggcccgcgctggtggatgagcgcgacagcgtggcgattaaactgtttgataatccgcag
gagcaacagcagatgatgtggcgcgggctgcgtcgactgcttctgctcaatatcccgtcg
ccgattaagtatctgcacgagaagctgccgaacaaagccaagctggggctgtactttaac
ccgtacggtaaagtgctggatctgatcgacgactgcatctcctgcggcgtggataagctg
atccacgaggcgggcggcccggtctggtcagaagagggctttgctcagcttcatgaaaag
gtgcgcgcggagctgaacgacaccgtggtagagattgccaaacaggtcgagcagatcctc
accgccgtgttcaatatcaacaagcgcctgaaggggcgggtggatatgaccatggcgctg
gggctgtcggacgtgaaggcgcagatggcggggctggtgtatcgcggctttgtcaccggc
aacggcttcaagcgtctgggggatacgctgcgttatttgcaggcgattgagaaacgtctg
gagaaaatggcggtggatccacaccgcgatcgcgcgcagatgctgaaggtcgaaaacgtg
cagcaggcgtggcagcagtggctgaacaagctgcctccggcgcgtcgtgatgatgacgac
gtgcgggagatccgctggatgatcgaggagctgcgcgtcagcttctttgctcagcagctt
ggcacgccgtacccgatttcggacaagcgtattttgcaggcaatggagcagatttccgcc
taa
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