Escherichia coli SMS-3-5 (environmental): EcSMS35_1775
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Entry
EcSMS35_1775 CDS
T00672
Symbol
ydbK
Name
(GenBank) pyruvate-flavodoxin oxidoreductase
KO
K03737
pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:
1.2.7.1
1.2.7.-]
Organism
ecm
Escherichia coli SMS-3-5 (environmental)
Pathway
ecm00010
Glycolysis / Gluconeogenesis
ecm00020
Citrate cycle (TCA cycle)
ecm00620
Pyruvate metabolism
ecm00650
Butanoate metabolism
ecm01100
Metabolic pathways
ecm01110
Biosynthesis of secondary metabolites
ecm01120
Microbial metabolism in diverse environments
ecm01200
Carbon metabolism
ecm01210
2-Oxocarboxylic acid metabolism
Module
ecm_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
ecm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
EcSMS35_1775 (ydbK)
00020 Citrate cycle (TCA cycle)
EcSMS35_1775 (ydbK)
00620 Pyruvate metabolism
EcSMS35_1775 (ydbK)
00650 Butanoate metabolism
EcSMS35_1775 (ydbK)
Enzymes [BR:
ecm01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.7 With an iron-sulfur protein as acceptor
1.2.7.1 pyruvate synthase
EcSMS35_1775 (ydbK)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POR_N
POR
EKR
PFOR_II
Fer4_7
Fer4_16
Fer4
Fer4_21
Fer4_10
Fer4_9
Fer4_2
Fer4_8
Fer4_6
Fer4_17
Fer4_18
Transketolase_C
Fer4_4
Fer4_15
FlgM
Motif
Other DBs
NCBI-ProteinID:
ACB19165
UniProt:
B1LG81
LinkDB
All DBs
Position
1788746..1792270
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AA seq
1174 aa
AA seq
DB search
MITIDGNGAVASVAFRTSEVIAIYPITPSSTMAEQADAWAGNGLKNVWGDTPRVVEMQSE
AGAIATVHGALQTGALSTSFTSSQGLLLMIPTLYKLAGELTPFVLHVAARTVATHALSIF
GDHSDVMAVRQTGCAMLCAANVQEAQDFALISHIATLKSRVPFIHFFDGFRTSHEINKIV
PLADDTILDLMPQAEIDAHRARALNPEHPVIRGTSANPDTYFQSREATNPWYNAVYDHVE
QAMNDFAAATGRQYQPFEYYGHPQAERVIILMGSAIGTCEEVVDELLTRGEKVGVLKVRL
YRPFSAKHLLQALPGSVRSVAVLDRTKEPGAQAEPLYLDVMTALAEAFNNGERETLPRVI
GGRYGLSSKEFGPDCVLAVFAELNAAKPKARFTVGIYDDVTNLSLPLPENTLPNSAKLEA
LFYGLGSDGSVSATKNNIKIIGNSTPWYAQGYFVYDSKKAGGLTVSHLRVSEQPIRSAYL
ISQADFVGCHQLQFIDKYQMVERLKPGGIFLLNTPYSADEVWSRLPQEVQAVLNQKKARF
YVINAAKIARECGLAARINTVMQMAFFHLTQILPGDSALAELQGAIAKSYSSKGQDLVER
NWQALALARESVEEVPLQPVNPHSANRPPVVSDAAPDFVKTVTAAMLAGLGDALPVSALP
PDGTWPMGTTRWEKRNIAEEIPIWKEELCTQCNHCVAACPHSAIRAKVVPPEAMENAPAS
LHSLDVKSRDMRGQKYVLQVAPEDCTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEE
KINYDFFLNLPEIDRSKLERIDIRTSQLITPLFEYSGACSGCGETPYIKLLTQLYGDRML
IANATGCSSIYGGNLPSTPYTTDANGRGPAWANSLFEDNAEFGLGFRLTVDQHRVRVLRL
LDQFADKIPAELLTALKSDATPEIRREQVAALRQQLNDVAEAHELLRDADALVEKSIWLI
GGDGWAYDIGFGGLDHVLSLTENVNILVLDTQCYSNTGGQASKATPLGAVTKFGEHGKRK
ARKDLGVSMMMYGHVYVAQISLGAQLNQTVKAIQEAEAYPGPSLIIAYSPCEEHGYDLAL
SHDQMRQLTATGFWPLYRFDPRRADEGKLPLALDSRPPSEALEETLLHEQRFRRLNSQQP
EVAEQLWKDAAADLQKRYDFLAQMAGKAEKSNTD
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgattactattgacggtaatggcgcggttgcttcggtggcgtttcgcaccagtgaagtt
atcgccatctaccctattacccccagttccacgatggcagaacaggctgatgcctgggcc
ggaaacggcttgaagaacgtttggggagacacaccacgcgtggttgaaatgcagtcggaa
gcgggtgctatcgctaccgtgcatggcgctttgcagacgggtgccctttcaacatcgttt
acgtcatcgcagggtttgctgctgatgatcccgacgctgtacaaactggcaggcgaactc
acaccgtttgtcctgcatgtagcggcacgtaccgttgccacacatgcactctctattttt
ggcgatcattccgacgttatggcggtgcgccagacgggttgcgcgatgttgtgtgcggct
aacgtccaggaagcgcaagactttgctctcatttcgcacatcgcaacgctgaagagccgc
gtgccatttattcatttctttgatggtttccgcacgtcccacgaaatcaataaaattgtc
ccgctggccgatgacactattcttgatctcatgccgcaggccgaaattgatgctcatcgc
gcccgggcgctcaacccggaacatccggtgatccgcggtacgtccgccaatcctgacact
tatttccagtctcgcgaagccaccaacccctggtacaacgcggtctatgaccatgttgaa
caggcgatgaatgatttcgctgccgcgacaggtcgtcagtatcagccatttgagtattat
gggcatccgcaagcggaacgggtgattatcctgatgggctcagccattggcacctgtgaa
gaagtggttgatgaattgctaacccgtggcgaaaaagtcggcgtgctgaaagttcgcctg
taccgtcccttctccgccaaacacttgctacaagctctgccgggatccgtacgcagcgtg
gcggtactggacagaaccaaagaacccggtgcccaggcagaaccgctctatctggatgtg
atgaccgcactggcagaagcctttaataatggcgagcgcgaaaccctgccccgtgtcatt
ggtgggcgctatggtctttcatccaaagaatttggcccggactgtgtactggcggtattt
gccgagctcaacgcggctaaaccgaaagcgcgctttacggttggtatttacgatgatgtg
accaatctgtcactgccgttgccggaaaacaccctgccaaactcggcgaaacttgaagcc
ttgttttatggccttggtagtgatggcagcgtttccgcgaccaaaaacaatatcaagatt
atcggtaattccacgccgtggtacgcacagggctattttgtttacgactccaaaaaggcg
ggcggcctgacggtttctcaccttcgcgtgagcgagcagccgattcgttccgcttatctg
atttcccaggctgattttgttggctgccaccagttgcagtttatcgacaaatatcagatg
gttgagcgtttaaaacctggcggcattttcctgctcaacacgccgtacagcgcagatgaa
gtgtggtcgcgcttgccgcaggaagttcaggccgtgttaaaccagaaaaaagcgcgcttc
tatgtgattaacgcggcgaaaatcgcccgcgaatgtggcctggcggcccgaattaatacc
gtcatgcagatggcttttttccatctgacgcaaattctgcctggcgatagcgccctcgca
gaattgcagggtgcgattgccaaaagttacagtagcaaaggtcaggatctggtggagcgc
aactggcaggctctggcgctggcacgtgaatccgtagaagaagttccgctgcaaccagta
aatccgcacagcgccaatcgaccgccagtggtttccgatgccgcccctgatttcgtgaaa
accgtaaccgcggcgatgctcgccgggcttggtgatgccctccccgtttcggcgctgccg
ccagacggcacctggccgatgggcaccacgcgctgggaaaaacgcaatatcgccgaagag
atccccatctggaaagaggaactctgtacccaatgtaaccactgcgtcgctgcttgccca
cactcagctattcgcgcaaaagtggtaccgcctgaagcgatggaaaacgcccctgccagc
ctgcattcgctggatgtgaaatcgcgtgatatgcgcgggcagaaatatgtcttgcaggtg
gctccggaagattgcaccggttgtaacctgtgcgtcgaagtttgcccggcgaaagaccgt
cagaatccagagattaaagccatcaatatgatgtcgcggctggaacatgtcgaagaagag
aaaatcaattacgatttcttcctcaacctgccagaaatcgaccgtagcaaactggaacgt
attgatattcgtacatcacagctgattacaccgctgtttgaatattccggtgcttgctcc
ggttgtggcgagacgccgtatattaaattgctgactcagctctatggcgatcggatgttg
atcgctaacgctacgggttgttcttcaatttatggtggtaacctgccctccacaccatat
accactgatgccaacggtcgtggaccggcatgggcgaactcgctgtttgaagataacgcc
gaattcggccttggtttccgccttacggtcgatcaacaccgtgtccgcgtgctgcgtctg
ctggatcaatttgccgataaaatcccggcggaattactgactgcgttgaaatcagacgct
acgccagagattcgtcgtgaacaggttgcagctttacgccagcaactcaacgatgttgcc
gaagcacatgaactgctgcgtgacgcagatgctctggtggaaaaatcaatctggctgatt
ggtggcgatggctgggcttacgatattggctttggcggtctggatcatgtattgagcctg
acggaaaacgtcaacattctggtgctggatacgcaatgctattccaacactggtggtcag
gcgtcgaaagcgacaccgctgggtgcagtaactaagttcggcgagcacggcaaacgtaaa
gcgcgtaaagatcttggcgtcagtatgatgatgtacggtcatgtttatgtggcgcagatt
tctctcggcgcgcagctgaaccagacggtgaaagcgattcaggaagcggaagcgtatccg
ggaccatcgctgatcattgcttatagcccgtgtgaagagcatggttacgatctggctctc
agccacgaccagatgcgccaactcactgctaccggcttctggccgctatatcgctttgat
ccacgtcgagccgatgaaggcaaactgccgctggcactggattcacgcccgccgtcagaa
gcactggaagaaacgttacttcatgagcaacgtttccgtcgtctgaattcgcagcagcca
gaagtggcagaacagttatggaaagatgctgcagctgatttgcaaaaacgctatgacttc
ctggcacaaatggccggaaaagcggaaaaaagcaacaccgattaa
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