Escherichia coli SMS-3-5 (environmental): EcSMS35_4377
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Entry
EcSMS35_4377 CDS
T00672
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ecm
Escherichia coli SMS-3-5 (environmental)
Pathway
ecm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ecm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EcSMS35_4377 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecm03400
]
EcSMS35_4377 (priA)
Enzymes [BR:
ecm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EcSMS35_4377 (priA)
DNA repair and recombination proteins [BR:
ecm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EcSMS35_4377 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA-like_WH
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
PriA_CRR
AAA_30
zinc-ribbons_6
AAA_19
AAA_22
TrwB_AAD_bind
CEP104_ZnF
Motif
Other DBs
NCBI-ProteinID:
ACB17833
UniProt:
B1LNP0
LinkDB
All DBs
Position
complement(4463477..4465675)
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AA seq
732 aa
AA seq
DB search
MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGVVVSVSDVSELPLNEL
KVVVEVLDVEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA
TEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASET
PEFSDWRKNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLEN
VLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIV
IGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPA
LETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQANNQ
VILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQQHLRCHHCDSQRPVPRQCPSCG
STHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQ
MLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHH
PEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLI
LSSPLADDKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRK
VKWVLDVDPIEG
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgcccgttgcccacgttgccttgcccgttccgcttcctcgtacctttgactatctgctg
ccagaaggcatgacggttaaagccgggtgtcgcgtgcgcgtgccgtttggcaaacagcag
gagcgcatcggggttgtggtgtcagttagcgacgtcagcgagctgccgctcaacgagctg
aaagtggtagtagaagtgctggacgttgagccggtatttactcactccgtctggcgatta
ctgctatgggcggcagattactatcatcatccgattggcgatgtgctgtttcatgccttg
ccgattttactgcgccaggggcggcctgcggcgaacgcgccgatgtggtactggtttgcc
actgaacaaggtcaggcggtggatctgaacagcctgaaacgttcgccaaagcaacaacag
gcactggcagcattgcgacaagggaaaatctggcgcgatcaggtcgccacgctcgaattt
aatgatgctgcactgcaggcgctgcgcaaaaaaggtctgtgtgatttagcaagtgaaaca
ccagagtttagcgactggcgaaagaattatgccgtttctggtgagcggttgcgattgaat
accgaacaggccaccgccgttggcgcaattcatagcgcggcagataccttctctgcctgg
ctgctggcgggcgtcaccggttccggtaaaacagaagtttatttgagcgtactggaaaac
gtgctcgctcagggcaagcaggcgctggtgatggtgccggaaatcggcctgacgccgcaa
actatcgcccgttttcgtgaacgttttaatgcccccgtggaagttctgcattccggcctg
aacgacagcgagcgcctttcggcgtggctgaaagcgaaaaatggcgaggcggcgattgtg
attggcacccgctccgcgctgtttacgccgtttaaaaatctcggcgtgattgtcattgat
gaagagcacgacagctcctacaagcagcaggaaggctggcgctatcatgcccgcgacctg
gcggtgtatcgtgcgcacagcgagcaaatcccgattattcttggctccgcaacgcccgcg
ctggaaacgttatgcaacgtccagcagaaaaaataccgcctgctgcgcctgacccgtcgg
gcgggcaatgcgcgcccggcaattcaacatgtgctggatttaaaaggtcagaaggtgcag
gcaggtctggctccggcgttaatcacccgtatgcgccagcatttacaggccaacaatcag
gttatcctctttcttaaccgccggggttttgcgcctgcgctactgtgccacgactgtggc
tggatagccgaatgcccacgttgcgatcactactacacgctgcatcaggcgcaacagcat
ttgcgttgccaccactgtgacagtcagcgtccggtgccgcgccagtgcccttcttgcggt
tccacgcacctggtccccgtggggctgggcaccgaacagcttgaacagacgctcgcaccg
ttgttccctggtgtgcccatttctcgtatcgaccgcgataccaccagccgtaaaggtgcg
ctggaacaacaactggcggaagtacatcgcggtggcgcgaggattttgatcggcacgcaa
atgctggcgaaaggtcaccactttccggatgtgacgctggtggcgttactggacgtagac
ggcgcgctgttttctgccgattttcgctcggcagagcgtttcgcccagctttacacccag
gtcgccggtcgtgccgggcgtgcgggtaaacagggcgaagtggtgctgcaaacgcaccat
cctgaacatccgctgttgcaaacgttgctctataaaggctacgacgcctttgccgaacag
gcactggctgaacgacgcatgatgcagctgccgccgtggaccagccatgtgattgtgcgt
gcggaagatcataacaatcagcacgcgccgctgttcctgcaacaactgcgtaatctcatc
ctctccagcccgctggcagacgacaaactgtgggttctcggtccggttccggcgctggct
ccgaaacgtggtggtcgctggcgctggcaaattttgttgcagcacccttcccgcgtgcgc
ttacagcacatcatcaatggtacgctggcacttattaatacaataccggattcccgcaag
gtgaaatgggtactggatgttgatccgattgagggttaa
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