Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_5432
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Entry
ECRM13516_5432 CDS
T03011
Symbol
slt
Name
(GenBank) Soluble lytic murein transglycosylase precursor
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
ecoh
Escherichia coli O145:H28 RM13516 (EHEC)
Brite
KEGG Orthology (KO) [BR:
ecoh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ecoh01011
]
ECRM13516_5432 (slt)
Enzymes [BR:
ecoh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
ECRM13516_5432 (slt)
Peptidoglycan biosynthesis and degradation proteins [BR:
ecoh01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
ECRM13516_5432 (slt)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
Cucumo_coat
TPR_6
TPR_19
Motif
Other DBs
NCBI-ProteinID:
AHG18010
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All DBs
Position
5391410..5393347
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AA seq
645 aa
AA seq
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MEKAKQVTWRLLATGVCLLTVSSVARADSLDEQRSRYAQIKQAWDNRQMDVVEQMMPGLK
DYPLYPYLEFRQITDDLMNQPAVTVTNFVRANPTLPPARTLQSRFVNELARREDWRGLLA
FSPEKPGTTEAQCNYYYAKWNTGQSEEAWQGAKELWLTGKSQPNACDKLFSVWRASGKQD
PLAYLERIRLAMKAGNTGLVTVLAGQMPADYQTIASAIISLANNPNTVLTFARTTGATDF
TRQMAAVAFASVARQDAENARLMIPSLAQAQQLNEDQIQELRDIVAWRLMGNDVTDEQAK
WRDDAIMRSQSTSLIERRVRMALGTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLERG
REAEAKEILHQLMQQRGFYPMVAAQRIGEEYELKIDKAPQNVDSALTQGPEMARVRELMY
WNLDNTARSEWANLVKSKSKTEQAQLARYAFNNQWWDLSVQATIAGKLWDHLEERFPLAY
NDLFKRYTSGKEIPQSYAMAIARQESAWNPKVKSPVGASGLMQIMPGTATHTVKMFSIPG
YSSPGQLLDPETNINIGTSYLQYVYQQFGNNRIFSSAAYNAGPGRVRTWLGNSAGRIDAV
AFVESIPFSETRGYVKNVLAYDAYYRYFMGDKPTLMSATEWGRRY
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaaagccaaacaagttacctggcggctgttggctaccggtgtctgtctgctgacg
gtcagcagcgtggcgcgagccgactcactggatgagcagcgtagtcgttacgcgcaaatc
aagcaggcctgggataatcgacaaatggatgtggtcgaacaaatgatgcctggactgaag
gattatccgctttatccctacctggaattccgccagatcaccgatgacctgatgaatcaa
ccggcggtgacggtcactaactttgttcgcgctaaccccacgcttcctcccgctcgcacg
ctgcaatctcgtttcgtcaatgaactggcgcggcgtgaagactggcgtggcttgttagcc
tttagcccggaaaagcccggaactaccgaagcgcaatgtaattactactatgcgaaatgg
aacaccgggcagagtgaagaagcctggcaaggggcgaaagagctgtggctaaccggcaag
agccagcctaacgcctgtgacaagttatttagcgtctggcgtgcgtcaggtaaacaagat
ccgctggcgtatttagagcgtatccgtctggcgatgaaagcgggtaacactggcctggta
acagtgctggcagggcagatgcctgccgattaccagactatcgcctcggcaatcatttca
ctggcgaacaaccctaatacggtactgaccttcgcgcgtacaaccggagcgaccgatttt
acccgtcaaatggcggcggtggcgtttgccagtgtggcgcggcaggatgctgaaaatgca
cggctgatgatcccgtcgcttgcccaggcgcagcagcttaatgaagatcagattcaggag
ctgcgcgatatcgtcgcctggcgtttgatgggcaacgatgtcaccgacgagcaggcgaaa
tggcgcgatgacgccattatgcgctcgcaatctacttcgcttattgaacgccgtgtgcga
atggcgcttggcaccggcgatcgtcgcggcctgaatacctggctggcgcgtctgcctatg
gaagcgaaagagaaagatgaatggcgttactggcaggcggatttattgctggaacgcgga
cgtgaagctgaagcaaaagagattttgcatcaactcatgcaacagcgtggtttctacccg
atggttgctgcacaacgcatcggcgaagagtatgagctgaagattgataaagcgccgcag
aatgttgacagcgccctgactcaggggccggagatggcgcgcgtgcgcgagttgatgtac
tggaatctcgataacaccgcgcgtagcgagtgggccaatctggtgaagagcaagtcaaaa
acagagcaggctcaactggcgcggtatgctttcaacaaccaatggtgggatcttagcgtt
caggcaacgatcgccgggaagctgtgggatcatctggaagagcgattcccgctggcttac
aacgatcttttcaaacgttacaccagtgggaaggagatcccgcaaagctatgcgatggcg
attgcccgtcaggagagcgcctggaatccgaaagtgaaatcaccggtaggggccagcggc
ctgatgcagattatgccgggcacggcgacccatacggtgaagatgttctctattcctggt
tatagcagccctgggcaattgctggatccggaaacgaatatcaacattggcaccagttac
ctgcaatatgtttatcagcaatttggtaataaccgtattttctcctcagcagcttataac
gccggacctggacgggtgcgaacctggcttggcaacagcgccgggcgtatcgacgctgtg
gcatttgtcgagagtattccgttctccgagacgcgcggttatgtgaagaacgtgctggct
tatgacgcttactaccgctatttcatgggggataaaccgacgttgatgagcgccacggaa
tggggacgtcgttactga
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