Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_5548
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Entry
ECRM13516_5548 CDS
T03011
Symbol
hlyA
Name
(GenBank) hemolysin A
KO
K11005
hemolysin A
Organism
ecoh
Escherichia coli O145:H28 RM13516 (EHEC)
Brite
KEGG Orthology (KO) [BR:
ecoh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecoh02000
]
ECRM13516_5548 (hlyA)
02042 Bacterial toxins [BR:
ecoh02042
]
ECRM13516_5548 (hlyA)
Transporters [BR:
ecoh02000
]
Other transporters
Pores ion channels [TC:
1
]
ECRM13516_5548 (hlyA)
Bacterial toxins [BR:
ecoh02042
]
Type II toxins: Membrane damaging toxins
Pore-forming toxins, RTX
ECRM13516_5548 (hlyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RTX
RTX_C
HemolysinCabind
Motif
Other DBs
NCBI-ProteinID:
AHG18126
LinkDB
All DBs
Position
pO145-13516:85344..88340
Genome browser
AA seq
998 aa
AA seq
DB search
MTVNKIKNIFNNATLTTKSAFNTASSSVRSAGKKLILLIPDNYEAQGVGINELVKAADEL
GIEIHRTERDDTAIANQFFGAAEKVVGLTERGVAIFAPQLDKLLQKYQKVGSKIGRTAEN
VGNNLGKAGTVLSALQNFTGIALSGMALDELLRKQREGEDISQNDIAKSSIELINQLVDT
VSSINSTVDSFSEQLNQLGSFLSSKPRLSSVGGKLQNLPDLGSLGDGLDVVSGILSAVSA
SFILGNSDAHTGTKAAAGIELTTQVLGNVGKAVSQYILAQRMAQGLSTTAASAGLITSAV
MLAISPLSFLAAADKFERAKQLESYSERFKKLNYEGDALLAAFHKETGAIDAALTTINTV
LSSVSAGVSAASSASLIGAPISMLVSALTGTISGILEASKQAMFEHVAEKFAARINEWEK
EHGKNYFENGYDARHAAFLEDSLSLLADFSRQHAVERAVAITQQHWDEKIGELAGITRNA
DRSQSGKAYINYLENGGLLEAQPKEFTQQVFDPQKGTIDLSTGNVSSVLTFITPTFTPGE
EVRERKQSGKYEYMTSLIVNGKDTWSVKGIKNHKGVYDYSKLIQFVEKNNKHYQARMISE
LGDKDDVVYSGAGSSEVFAGEGHDTVSYNKTDVGKLTIDATGASKPGEYIVSKNMYGDVK
VLQEVVKEQEVSVGKRTEKIQYRDFEFRTGGIPYDVIDNLHSVEELIGGKHDDEFKGGKF
NDIFHGADGNDYIEGNYGNDRLYGDDGDDYISGGQGDDQLFGGSGNDKLSGGDGNNYLTG
GSGNDELQAHGAYNILSGGTGDDKLYGGGGIDLLDGGEGNDYLNGGFGNDIYVYRQNYGH
HTIADEGGKGDRLHLSDISFDDIAFKRVGNDLIMNKAINGVLSFNESNDVNGITFKNWFA
KDASGADNHLVEVITDKDGREIKVDKIPHNNNERSGYIKASNIASEKNMVNITSVANDIN
KIISSVSGFDSGDERLASLYNLSLHQNNTHSTTLTTTV
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atgacagtaaataaaataaagaacattttcaataatgcgacattgactacaaaatcagca
tttaatacagcatcatcaagcgtacgttccgctggcaaaaaactcatattattaatacct
gataattatgaagctcagggcgtgggtattaatgagttggtcaaagctgctgatgagctt
ggaatagaaatacaccgtactgaacgagatgatacagcgattgcaaaccagttttttggt
gcagcagaaaaagttgtaggattaactgaacgtggtgttgcaatattcgcaccacaactt
gacaaacttctgcagaagtatcagaaagttgggagtaaaataggaagaaccgctgaaaat
gtaggtaataatctgggaaaagccggaacagttctctcagcactacagaattttacgggg
attgctttatcaggcatggctcttgatgaattgctgagaaaacaacgggaaggagaggat
ataagtcagaatgatattgccaaaagtagtattgaacttattaatcagcttgtagataca
gtatcaagtataaacagtaccgttgattcattttctgagcagcttaaccagcttggctca
tttttatccagtaaacctcgcttaagttctgttggtgggaaattacaaaatttaccagac
ctgggctccctgggggatgggctggatgttgtctccggaattctttctgctgtatcagca
agctttattctgggaaacagtgacgcacatacaggaacaaaagctgcagcgggtatcgaa
ctgacaactcaggttcttggaaatgttggtaaagctgtttcgcaatatattctggctcag
agaatggcacaggggttatcgacaacagctgcaagtgcgggtctgatcacatcggctgtt
atgctggctatcagtcctctttctttcctggctgctgcagataaatttgagcgagctaag
cagcttgaatcatattctgaacgatttaaaaaattgaattatgaaggggatgctttactc
gcagcctttcataaagaaaccggagctatagatgcagccctgacaacaataaatactgtc
ctgagttctgtatctgcgggagttagtgcagcctccagtgcatccctcataggggccccg
ataagcatgctggtgagtgcattaaccggtacgatatctggcattctggaagcatcaaaa
caggctatgtttgagcacgttgcagagaaattcgctgctcggatcaatgaatgggaaaag
gagcatggcaaaaattattttgagaatggctatgacgcaagacatgctgcgtttttagaa
gactctctgtctttgcttgctgatttttctcgtcagcatgcagtagaaagagcagtcgca
ataacccagcaacattgggatgagaagatcggtgaacttgcaggcataacccgtaatgct
gatcgcagtcagagtggtaaggcatatattaattatctggaaaatggagggcttttagag
gctcaaccgaaggagtttacacaacaagtgtttgatcctcaaaaagggaccatagacctt
tcaacaggtaatgtatcaagtgttttgacatttataacaccaacatttaccccaggagaa
gaagttagagaaagaaaacagagtggtaaatatgaatatatgacatctcttattgtaaat
ggtaaggatacatggtctgtaaaaggcataaaaaatcataaaggtgtatatgattattca
aaattgattcagtttgttgaaaagaataacaaacactatcaggcgagaatgatttctgaa
ctcggagataaagacgatgtggtttattctggagcaggctcatcagaagtatttgctggt
gaaggtcatgataccgtatcttataataagacggatgttggtaaactaacaattgatgca
acaggagcatcaaaacctggtgagtatatagtttcaaaaaatatgtatggtgacgtgaag
gtattgcaggaagtcgttaaggaacaggaggtgtcagtagggaagcgaacagagaaaata
caatatcgtgattttgaattcagaaccggtggaattccttatgatgtaatagataatctt
cattctgttgaagagctcattggcggaaaacatgatgatgaattcaaaggcggtaagttt
aatgatatattccatggcgcagatgggaacgattatatcgaaggtaattatggtaatgat
cgactatacggcgatgatggggatgattatatatccggaggacagggagacgaccagtta
tttggtggtagtggaaacgataaattgagtggaggggatggtaataattatctgacagga
ggaagcggtaatgatgagcttcaggcacacggagcttataatattctgtcaggtggtact
ggtgatgataaactttatggtggtggtggtattgatcttctggatggaggggaaggtaat
gactatctgaatggtggttttggtaatgatatttatgtttataggcaaaactatggtcat
catacaattgcagatgaaggaggtaaaggagatcgtttgcacttatctgatattagcttt
gatgatatcgcatttaagagagttggaaatgatcttatcatgaataaagccattaatggt
gtactttcatttaatgagtcaaatgatgtcaatgggataacatttaaaaactggtttgcg
aaagatgcctcaggagcagataatcatcttgttgaggttataacagataaagatggtcga
gagataaaagttgataaaatacctcataataataatgaacggtcaggttatataaaagcc
agtaatatagcatctgaaaaaaacatggttaatatcaccagtgttgccaatgatattaat
aagattatttcttcagtttcagggttcgattcaggtgatgaacgattagcatctttatat
aatttatccttacatcaaaacaacacacactcaacaactttaacgacaactgtctga
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