Escherichia coli JJ1886: P423_07865
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Entry
P423_07865 CDS
T02896
Name
(GenBank) RNA helicase
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
ecoj
Escherichia coli JJ1886
Brite
KEGG Orthology (KO) [BR:
ecoj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ecoj03009
]
P423_07865
Enzymes [BR:
ecoj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
P423_07865
Ribosome biogenesis [BR:
ecoj03009
]
Prokaryotic type
rRNA helicases
P423_07865
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Motif
Other DBs
NCBI-ProteinID:
AGY84294
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All DBs
Position
1585193..1586566
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AA seq
457 aa
AA seq
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MTAFSTLNVLPPAQLTNLNGLGYLTMTPVQAAALPAILAGKDVRVQAKTGSGKTAAFGLG
LLQQIDASLFQTQALVLCPTRELADQVAGELRRLARFLPNTKILTLCGGQPFGMQRDSLQ
HAPHIIVATPGRLLDHLQKGTVSLDALNTLVMDEADRMLDMGFSDAIDDVIRFAPASRQT
LLFSATWPEAIAAISGRVQRDPLAIEIDSTDALPPIEQQFYETSSKGKIPLLQRLLSLHQ
PSSCVVFCNTKKDCQSVCDALNEVGQSALSLHGDLEQRDRDQTLVRFANGSARVLVATDV
AARGLDIKSLELVVNFELAWDPEVHVHRIGRTARAGNSGLAISFCAPEEAQRANIISDML
QIKLNWQTPPANSSIVPLEAEMATLCIDGGKKAKMRPGDVLGALTGDIGLDGADIGKIAV
HPAHVYVAVRQAVAHKAWKQLQGGKIKGKTCRVRLLK
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgctttttctaccctgaatgttttgcctcccgcccaactcacaaaccttaatggg
ttgggttatttaaccatgacgccggtgcaggccgccgcgcttccggcgatccttgccgga
aaagatgttcgcgtgcaggcgaaaaccggcagcggcaaaacggcggcttttggcctcggc
ttgttacagcaaattgatgcgtcgctatttcaaacccaggctttagtgctgtgtcctacg
cgtgaactggcggatcaggtggcaggtgaattgcgtcggctggcgcgttttctgccaaat
accaaaattttgacgttgtgcggtggtcaaccgttcggtatgcagcgtgattcgttacaa
catgcgccgcatattatcgtggcaacgccgggccgtttgctggatcacctgcaaaaaggc
actgtatcactggatgcgttgaatacgctggtgatggatgaggccgaccgcatgctggat
atgggatttagtgacgccattgatgatgtcatccgttttgcgccagcatctcggcagaca
cttctgttttcggcaacctggccggaagccattgccgcaatcagcggaagagtgcagcgc
gatcctttagcgattgaaattgactcaacagatgctctgccacctattgaacaacaattt
tatgagacatccagcaaaggcaaaattcctctgttgcaacggttattaagcttgcatcag
ccatcctcttgcgtggtgttttgcaataccaaaaaagattgccagtctgtctgcgacgcg
ctgaatgaagtagggcaaagtgcattgtcgttacacggcgatctggagcaacgcgatcgc
gatcagaccctggtacgttttgctaacggtagcgcccgtgtactggtcgcgactgatgtt
gctgcgcgtggtctggatataaaatcgcttgagctggtggtgaactttgagctggcgtgg
gaccctgaagttcatgtacatcgcatcggtcgtacagctcgtgcaggaaatagcggtctg
gcgatcagtttctgtgctccggaagaagcacagcgggccaatatcatttctgacatgttg
cagataaaacttaactggcaaacgccgccagcgaatagttccattgtgccgctggaagca
gaaatggcaacgttgtgtatcgatggcgggaaaaaagccaaaatgcgcccgggtgatgta
ttaggtgcgctgacaggagacatcgggcttgatggcgcagatattggcaaaattgccgtg
catccggcgcatgtttatgtcgcggtgcgtcaggctgttgctcataaagcatggaaacag
ttacagggcgggaagattaaaggaaaaacgtgccgggtgcggttattaaaataa
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