Etheostoma cragini (Arkansas darter): 117938073
Help
Entry
117938073 CDS
T07493
Symbol
si:dkey-225n22.4
Name
(RefSeq) collagen alpha-1(XXI) chain
KO
K16629
collagen type XXI alpha
Organism
ecra
Etheostoma cragini (Arkansas darter)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
VWA
VWA_2
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
117938073
NCBI-ProteinID:
XP_034718296
LinkDB
All DBs
Position
22:complement(5099981..5188036)
Genome browser
AA seq
921 aa
AA seq
DB search
MLLWSLWSSILLLTPLKAAEEEDVRAGCSTAVNDLVYIVDGSWSVGFSDFDTAKQWLINI
TSQFDISSHYTQVAVIQYSDTPRLEIPLGKHQGGGELIQAIQSITYLGGNTQTGRAIKFA
VDHVFSSSQRSSQVKNRIAVVVTDGKSQDDVVDASMEARAQGITVFAVGVGSEITTSELV
SIANRPSSTYVLYAEDYTTIDRIRDSMEQKLCEESVCPTRIPVASRDEKGFELMLGMKIQ
KKAKEIPGSLASEAAYALTVSTDITENTRDIFPEGLPPSYVFVATLRLKGSASMLTFDLW
RVLSKDKEIQAAVTLNGKDKSVIFTTTTSITEKEQSVTFKAGFQTLYDGKWHQLKLLVRP
RQVSSFLDDQPIQDIMLKQVEPIYINGETQVAKRRGTDITVPVEIQKLRLYCDPYQSERE
TACEIYSVDDERCPLNRTATVEEEDCNCAVSPQGPPGPMGFRGEKGREGPPGPDGKPGED
GIPGESGSPGLPGMKGEAGPAGLRGEPGLKGNKGDRGEPGLSGKPGPPGPKGLPGERGEL
GPPGEAGPVGEPGLPGTGGQIGPPGPKGEKGVSGAAGAAGAQGAPGERGLPGPQGPPGLT
GTLGTQGPRGLPGEIGRDGPKGKSGDQGVTGPIGPPGQKGSRGESGFPGPPGAMGMPGFK
GHKGDRGEAGSKGHQGEPGRDGDPGTPGVPGEVGPRGRKGETGVIGDVGHRGPEGKKGDM
GHMGAVGPRGFPGHDGFPGQPGQPGYPGKPGKPPSDEHLLKLCTDVLRNQLPALLQTLAP
PARCEPCQSMKGPAGEPGAPGPKGSMGTPGYPGRSGTPGYPGPSGMQGPAGLKGDTGPRG
LKGSKGEGYHGPPGAPGQPGIQGPRGFDGIGHPGNQGIPGKPGPPGHPGKRGNPGLPGVC
DMSMCYQMYNVREHYSKGPNV
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgttgctgtggtcattatggagttcaatattgctactgacccccctgaaggctgcagaa
gaggaagatgtccgtgcaggctgcagcacagctgtaaacgacctggtctatattgttgat
ggctcatggagtgtgggcttctctgactttgacacggccaagcagtggcttatcaacatc
accagccaatttgacatcagttcccactacacacaggtggctgtgattcagtacagcgac
actcctcgtctggagattcctctggggaaacaccagggtggaggcgagctcatccaggcc
atacagagcatcacctacctgggaggaaacacacagactggcagggccatcaagtttgcc
gtggaccatgtcttctcttcctcccaaagatccagccaggtcaagaaccgcatcgctgtg
gtggttactgatggcaaatctcaggatgatgtggttgatgccagtatggaggcacgagct
cagggcattacagtattcgctgttggagttggcagtgagatcaccacatcggagcttgta
tccatcgccaatagaccatcatccacctatgtcctttatgccgaagattacaccaccatt
gaccgcattcgagactccatggaacaaaagctctgtgaagagtctgtgtgtccaacacga
atcccagtggcatctcgtgatgagaaaggctttgagctgatgctgggcatgaaaattcag
aagaaggccaaggagatccctggctccctggcttctgaggcagcctacgcactgactgtc
tccacagacattactgagaacaccagggatattttcccagaaggcctccctccatcctat
gtgttcgtagcaacgctgcgtctaaaggggtctgctagcatgctgacctttgacctttgg
agggtgctgtctaaagataaagagatccaggctgcagtgacactaaatggaaaggacaaa
agtgtcatcttcaccaccaccaccagtattacagaaaaggagcagagtgtcacctttaaa
gcaggctttcagactctgtatgatggaaagtggcatcagttgaaactcctggtgagaccc
cgccaggtctccagtttccttgacgatcagcctatccaggatataatgctgaaacaggtg
gagcctatttacatcaacggggagacacaggttgctaaaaggcgaggaacagacatcact
gtgcctgtggagattcagaagctgcgtctgtactgtgatccttatcagagtgagagagaa
acagcttgtgagatttactccgtggatgatgaaaggtgtcccctgaatcggacagctacg
gtggaggaagaagactgcaactgtgccgtcagtccacaagggccgccaggacccatgggt
ttccgaggcgagaaagggagggaaggaccaccaggacctgatggtaagcctggtgaagat
gggatacctggggaatccggctctcctggattaccagggatgaagggtgaagctggcccg
gcagggctaagaggggagcctggtctgaaaggtaacaagggagacagaggggaaccaggc
ttatcaggaaaaccaggacccccaggacccaagggtcttccgggtgagagaggcgagcta
ggacctccaggagaagctggaccagtgggggaaccaggactaccaggcaccggcggacag
attgggccaccaggaccaaagggagagaagggagtcagtggtgctgctggagctgctgga
gctcaaggcgccccgggcgagagaggcttgcctgggccccaaggaccacctggactaact
ggcactctgggaacccagggccctcggggactgcccggagagattggccgagatggtccc
aaggggaagtctggagaccaaggggtcactggtcctattggtccaccaggccagaagggc
tcaagaggagagtcaggttttcctgggccgccgggggccatggggatgccggggttcaaa
ggtcacaagggggatagaggtgaggcgggctctaaaggacaccagggggagccaggcaga
gatggagatccagggactcctggtgtacctggtgaagtgggacccaggggaaggaaagga
gagacaggagtgataggtgacgtaggccacagggggcctgaaggaaagaaaggggacatg
ggccacatgggtgctgttggacccaggggatttcctggtcatgacgggtttccaggccaa
ccaggccaaccaggatatcctgggaaacctggcaagcctccctcagatgaacatcttcta
aagctctgcactgatgttctgcgtaatcaactcccggcactactccagaccctggccccc
ccagctaggtgtgaaccatgccagagcatgaagggacccgcaggtgagccaggagcccca
ggacccaaaggctctatgggcactccaggttaccctggcaggagtggcacccccggttac
ccaggaccttctggaatgcagggccctgcaggcctcaaaggtgacacaggaccgagaggg
ctcaaaggcagcaaaggagaaggttaccatggacctccaggggcccctggacagccagga
attcagggtcctcgtggctttgatggaatcggccatccaggaaaccagggaattcctgga
aaaccgggaccaccaggacatcctggtaaacggggcaacccagggcttccaggggtttgt
gatatgtccatgtgttatcagatgtacaacgtcagagaacattacagcaaaggacccaac
gtctga
DBGET
integrated database retrieval system