Etheostoma cragini (Arkansas darter): 117942646
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Entry
117942646 CDS
T07493
Symbol
cacna1da
Name
(RefSeq) calcium channel, voltage-dependent, L type, alpha 1D subunit, a isoform X1
KO
K04851
voltage-dependent calcium channel L type alpha-1D
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04010
MAPK signaling pathway
ecra04020
Calcium signaling pathway
ecra04218
Cellular senescence
ecra04260
Cardiac muscle contraction
ecra04261
Adrenergic signaling in cardiomyocytes
ecra04270
Vascular smooth muscle contraction
ecra04530
Tight junction
ecra04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117942646 (cacna1da)
04020 Calcium signaling pathway
117942646 (cacna1da)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
117942646 (cacna1da)
09144 Cellular community - eukaryotes
04530 Tight junction
117942646 (cacna1da)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
117942646 (cacna1da)
09153 Circulatory system
04260 Cardiac muscle contraction
117942646 (cacna1da)
04261 Adrenergic signaling in cardiomyocytes
117942646 (cacna1da)
04270 Vascular smooth muscle contraction
117942646 (cacna1da)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ecra04040
]
117942646 (cacna1da)
Ion channels [BR:
ecra04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
117942646 (cacna1da)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CAC1F_C
Ca_chan_IQ
GPHH
PKD_channel
FAM176
Motif
Other DBs
NCBI-GeneID:
117942646
NCBI-ProteinID:
XP_034724078
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All DBs
Position
4:complement(14797870..14858618)
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AA seq
2127 aa
AA seq
DB search
MSANGPAPDPVPEAPPASNPAPAAAPAPAHVAPPAPPALPAPASTTIPAGALAQKKRQQY
AKSKKQGSNANSRPPRALFCLKLNNPIRRACISLVEWKPFDIFILIAIFANCMALAVYVP
FPADDSNSTNHDLETVEYAFLIIFTIETFLKIIAYGLVMHQNAYVRNGWNMLDFVIVVIG
LFSVVLELLTKEEKVESEAEGEGIHPSMQGHGGKPGGFDVKALRAFRVLRPLRLVSGVPS
LQVVLNSIIKAMVPLLHIALLVLFVIIIYAIIGLELFIGKMHATCFIPGSDVIAEEEPAP
CAISGHGRQCPINGSVCREGWHGPNGGITNFDNFLFAMLTVFQCITMEGWTDVLYWMNDA
MGLELPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQLEEDLK
GYLDWITQAEDIEPDNEDEADEGTKRNRVTLADLTEKKKGRFGWFSQSSDTHASVPPSET
ESVNTENQNGEEEKTPCCGPLCQKISKSKFSRRWRRWNRFCRRKCRLAVKSVPFYWLVII
LVFLNTLTISSEHYNQPMWLTQVQDVANKVLLALFTCEMLVKMYSLGLQAYFVSLFNRFD
CFVVCGGITETILVELEVMSPLGISVFRCVRLLRIFKVTRHWQSLSNLVASLLNSMKSIA
SLLLLLFLFIIIFSLLGMQVFGGKFNFDETQTKRSTFDNFPQALLTVFQILTGEDWNAVM
YDGIMAYGGPSSSGMIVCFYFIILFICGNYILLNVFLAIAVDNLADAESLNTDEGDKKGD
KKEDEKDDKDEEEEIDDTAAEEEDPEVPSGPRPVISDLIKKEKITPIPEGSAFFIFSTTN
PFRVFCHKLINHHIFTNLILVFIMLSSVSLAAEDPIRNFSARNIVLGYADYVFTSMFTFE
IILKMTTYGAFLHKGAFCRNYFNLLDLLVVGVSLVSFGIQSSAISVVKILRVLRVLRPLR
AINRAKGLKHVVQCVFVAIRTIGNIMIVTTLLQFMFACIGVQLFKGKFYRCTDEAKSNSD
ECKGTYILYKEGDVNQPTIHKRLWHNSDFNFDNVLMAMMALFTVSTFEGWPSLLYKAIDS
NRENLGPIYNYRVEISIFFIIYIIIIAFFMMNIFVGFVIVTFQEQGEKEYKNCELDKNQR
QCVEYALKARPLRRYIPKNPYQYKFWYVVNSTGFEYIMFVLIMLNTLCLAVQHYGQSALF
NYVMDILNMVFTAVFTVEMVLKLIAFKPRHYFADAWNTFDALIVVGSVVDIAITEVNKLV
EPTETPQVDEQGNTEDSARISITFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQALPYV
ALLIAMLFFIYAVIGMQVFGKVAMVDGTHINRNNNFQTFPQAVLLLFRCATGEAWQEIML
ACMPGKLCDPESDYNPGEEMTCGSGFAIIYFITFYMLCAFLIINLFVAVIMDNFDYLTRD
WSILGPHHLDEFKRIWSEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKLCPHRVACKRLVA
MNMPLNSDGTVMFNATLFALVRTALKIKTEGNLEQANEELRAVIKKIWKRTSMKLLDQVV
PPAGDDEVTVGKFYATFLIQDYFRKFKKRKEEGLVGAHPAQNNTAIALQAGLRTLHDIGP
EIRRAISCDLQDDELVDFIPEEDEEIYRRNGGLFGNHLMNGGHRRSNGHQTNATQRPLQV
QPPPHYAHMEQPVGRLSRANAMSHPNNHHHHHNHHHHRHHNSYGKSPKSTNINLNNANVS
SLPNGGHHRYYEHAPPNGYPGLRSSYYDYDKPRTPQAQRRRYYETYVRSHGVDGHHPTIR
REEELDEDRFSGEYYSGEEFYEDDSMLSGDRYANSDTEYETPKGYHHPDSYYDDDEQPLY
RDSRRSPKRRLLPATPQGILSPAACNRRPSFNFECLRRQGSQDELPHQRTALPLHLMQHQ
VMAVAGLDSSRAHRLSPTRSTRSWATPPATPASKDQSPYYTPLIRVDRPHRESAASSHVS
LRKSSWYTDDPEFSQRMYSPVHLQVPPEYHNQYHQKRGSATSLVEAVLISEGLGRYAKDP
KFVAATKHEIADACEMTIDEMESAASHLLNGGMAPSINGVNVFPLLTSRDYELQDTAASY
SDEEPETEPRAPYEEDLADEMICITTL
NT seq
6384 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccaacgggcctgccccagacccagtcccagaggcccctcccgcctcaaaccct
gcccctgctgcggccccagccccggcccatgttgcaccacccgcacctcctgccctgcct
gccccagcatctactaccatcccggcaggtgcgttggcacagaagaagcggcagcagtat
gccaaaagcaagaaacagggcagtaatgccaacagcaggccaccaagggctctgttctgc
ctcaaacttaacaaccccatacgcagggcctgcattagcctggtggagtggaagccattt
gatatatttatattaattgctatttttgccaactgtatggccttagctgtctatgtcccc
ttccctgcagatgattccaactccacaaaccatgacctggaaaccgttgagtatgccttc
ctcatcattttcacaattgagacctttctgaagatcattgcttacggcttggtgatgcat
cagaatgcgtacgtgagaaacggttggaatatgctggattttgtcattgtcgtcatagga
ctcttcagtgttgtcttggagcttttgaccaaagaagagaaggtagaaagcgaagcagaa
ggagaaggtatccatccatcaatgcaaggacacggaggaaaaccaggtggattcgatgtt
aaagcccttcgagccttccgtgtgctgcgacccctgcggctggtctcaggagtacccagt
ttacaggtggtgttgaactccatcattaaagccatggtccctctccttcacattgccctc
ctggtcttatttgtaatcatcatctatgcgattatcggcctggagcttttcatcggtaaa
atgcacgcaacctgctttattcctggctcagatgtgatagcagaagaggaaccagctcca
tgtgcgatctcagggcatgggcggcaatgccctatcaatggcagcgtgtgcagggaaggc
tggcatggtcccaacggtggcatcaccaactttgacaacttcctgtttgccatgctgaca
gtgtttcagtgtatcaccatggagggctggacggacgtgctatactggatgaatgatgct
atgggtcttgagcttccatgggtgtactttgtcagtcttgtgatcttcggctcctttttc
gttcttaacctggttttgggtgtgttgagcggagagttctccaaggagagagagaaggct
aaagcccgtggagacttccaaaagctgcgtgagaagcagcagctcgaggaggatctgaaa
ggttacttggattggatcactcaggctgaagacatcgaacccgacaacgaggatgaggct
gacgaggggacaaagcgcaaccgggtgactctggctgaccttactgagaagaagaaagga
aggtttgggtggttcagccagtcgtccgacactcatgcaagcgttccacccagcgaaaca
gaatctgtgaacactgagaatcaaaacggggaggaggagaagacaccatgctgcggacca
ctgtgtcaaaaaatttcaaagtcaaagttcagtcggcgctggcgccgttggaacaggttc
tgccgcaggaagtgccggttggctgtaaaatcggtgcctttctattggttggtcatcatc
ctggtgttcctcaacacgctcaccatatcatcagagcattacaaccagccaatgtggctc
acacaagtacaggatgtggccaacaaggtgctgctagccctgttcacatgtgaaatgttg
gtgaagatgtacagtctcgggctacaggcctattttgtatcattgttcaaccgctttgac
tgctttgtggtgtgtggaggaatcacggaaaccattctggtcgagctggaagtcatgtct
cctctcggcatctctgtgttccgctgcgtccgcctgctgaggatcttcaaagtcacacgt
cactggcagtctttaagtaacctcgtggcatctctgctcaactccatgaagtccattgct
tccctgctgctgctgctcttcctcttcatcatcatcttctcgctgctgggcatgcaggtg
tttggtggaaagtttaactttgacgagacccagaccaagaggagtacatttgacaacttt
ccccaagcccttctcactgtgtttcagatcctgactggagaagactggaacgccgttatg
tacgatgggatcatggcgtatggaggcccttcctcttctgggatgattgtgtgtttttac
ttcatcatcctcttcatctgtggaaactatatccttctgaatgtcttcttggctatcgct
gtggacaacttggcagatgcagagtctctcaacacagacgaaggagacaagaaaggggac
aaaaaggaggatgaaaaagatgacaaggatgaagaagaggagattgacgacactgcagca
gaggaagaggatccagaagttccatctgggcctcggccggtcatctctgacctaataaag
aaggagaagattactcctatcccagagggaagcgccttcttcatctttagcaccacaaac
ccgtttcgtgtgttttgccacaaactcatcaaccaccacatattcaccaacctcatcctg
gtgttcatcatgctcagttctgtctcactcgctgctgaggatccgatccgaaacttctca
gctcgcaatattgtcctaggctatgcagattatgtcttcactagtatgtttacatttgag
atcatattgaagatgacaacatatggagcctttctacataaaggggcattctgtaggaat
tacttcaacctcctggacctgttggtggtgggagtttcccttgtctcttttggcattcag
tcctcggccatctctgtggtgaagattcttagggtcctgcgtgttctccgaccccttcgt
gcaatcaaccgggccaaaggcctaaagcacgtggtgcagtgtgtgtttgtggccatcaga
actatcggtaacatcatgatcgtcactaccctgctccagttcatgtttgcctgtataggt
gtgcagctatttaagggaaaattctatcgctgcacggatgaagccaagtccaactcagat
gagtgcaagggcacctacatcctgtataaggaaggagatgtgaaccagccaaccatccac
aaacgactgtggcacaacagcgacttcaacttcgataacgtcctcatggctatgatggct
ctgttcaccgtgtccacttttgaaggctggccttctttactgtacaaggcaatcgactcc
aacagggagaacctcggtcccatttacaactaccgcgtggagatttccatcttcttcatc
atctacatcatcatcattgctttcttcatgatgaacatctttgtaggttttgtgatcgtc
acatttcaggaacaaggagagaaagagtacaaaaactgtgaactcgacaagaaccagcgt
cagtgtgtggagtacgctcttaaggcacgtccgctgaggaggtacatccctaagaacccg
taccagtacaagttctggtatgtggtgaactcaactggctttgagtacatcatgtttgtg
ctcattatgctcaacacgctctgcctggctgtgcagcactacggacagtcagcgctcttc
aactatgtaatggacattcttaatatggtcttcactgctgtcttcactgtggaaatggtt
ctcaaactcatcgctttcaaacccaggcactatttcgctgatgcttggaacacatttgat
gccttaattgttgttggtagcgtcgtcgatattgctatcactgaagttaataaacttgta
gagccaacggagactcctcaggtggatgagcaggggaacacggaggacagcgctcgcatc
tccatcaccttctttcgtctgtttcgagtcatgcggctggtcaagctgcttagcagaggg
gagggcattcgcactctgctctggactttcatcaaatccttccaggctctgccatatgtt
gctcttctgatagccatgctgttcttcatctacgctgtcattggcatgcaggtgtttgga
aaggttgccatggtggacggcacgcacatcaacagaaacaacaactttcagaccttccct
caggctgtgctccttctcttcagatgtgccactggagaggcatggcaggagatcatgttg
gcctgtatgccagggaaactgtgtgaccccgagtctgattacaaccctggggaggagatg
acctgtggcagtggatttgcaataatttacttcatcaccttttacatgctctgcgccttt
ttgattataaatttgtttgtggccgtcatcatggacaactttgactatctcacacgtgat
tggtccattcttggtccacaccacctcgatgaattcaagagaatttggtcagagtacgac
ccggaggctaagggcagaattaaacatctggatgttgtgacacttcttcgtcgaatccag
cctcctctcggctttggcaaactgtgccctcacagagtggcttgcaagaggctggtagcc
atgaacatgcctctgaacagtgacggcacagtcatgtttaacgctactttgtttgcactg
gtgcgcactgccctgaagatcaaaacagaaggtaatctagagcaggccaacgaagagctg
cgagctgtcatcaagaaaatctggaagagaaccagcatgaagctgctcgatcaagtggtg
cctcctgctggtgatgatgaggtaaccgtggggaagttctatgccaccttcctgatacag
gactactttaggaaattcaagaaacgtaaagaggaaggcctggtgggtgctcacccagcg
cagaacaacacagctatcgcattacaggctggccttcgcacgctgcatgatattgggccc
gaaattcgccgagcgatatcatgtgatctgcaagatgacgagctagtagactttattcca
gaggaagacgaggaaatttataggcgtaatggtggactctttggcaaccatctcatgaac
ggtggtcatcgtcgatccaacggccaccagaccaacgccacacagcgacctctgcaggtg
cagcctccacctcactacgcccacatggagcagccggttggacgtctgtctcgagccaat
gcaatgtcccaccccaacaaccaccatcaccaccacaaccaccatcaccaccgccaccac
aactcctatggaaagtcgcccaaatccaccaacatcaacctcaacaatgccaacgtgtcc
agtttacccaacggaggacaccatcgctactatgaacatgcacctcccaatggctaccca
ggtcttcgcagctcctactacgactacgacaagccccggacaccccaggctcaaagaagg
cgctactatgagacctatgttaggtcccacggagttgatggacaccaccctaccatccgc
agagaggaggagttagatgaagaccgcttctctggggagtattacagtggggaggagttt
tatgaagacgacagtatgctgtcaggggacaggtatgcaaacagtgacacggagtatgag
actcccaaaggttaccatcatcccgacagttactatgacgatgacgagcagcctctctac
cgtgactctcgaaggtcaccaaagagaaggttgcttcctgccacacctcaaggtatctta
tcccctgcagcatgtaacaggaggccatccttcaactttgagtgtctgcgcagacaaggt
agccaggacgagcttccacatcaacgtactgctctaccactgcaccttatgcagcaccag
gttatggctgtagcaggcctggactccagcagagcccaccgcctctccccaacccgctcc
acccgctcctgggccactcctcctgccactccggccagtaaagaccaatcaccatactac
acccctctcatccgtgtggaccgcccgcacagggagagtgctgctagcagccacgtgtct
ctgcgcaagagctcctggtacacagacgacccagagttctcccagaggatgtactcacct
gtccacctgcaggtgccacctgagtatcacaaccagtatcaccagaagagaggcagcgcc
accagccttgtggaagcggtgttgatatcagaagggcttgggagatatgccaaggatccc
aagtttgttgctgccacaaagcacgaaatagcagatgcgtgtgagatgacaatagatgag
atggagagtgcagccagccacctgctgaacggagggatggccccgagcatcaatggtgtc
aacgtgttcccccttctgacttcaagggactatgaactgcaggacactgcagccagctac
agcgacgaggagcctgagacagagccgagagctccttatgaggaagacctggcagatgag
atgatctgcatcactactttatag
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integrated database retrieval system