Etheostoma cragini (Arkansas darter): 117942941
Help
Entry
117942941 CDS
T07493
Symbol
usp4
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 4
KO
K11835
ubiquitin carboxyl-terminal hydrolase 4/11 [EC:
3.4.19.12
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ecra01002
]
117942941 (usp4)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecra04121
]
117942941 (usp4)
Enzymes [BR:
ecra01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117942941 (usp4)
Peptidases and inhibitors [BR:
ecra01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
117942941 (usp4)
Ubiquitin system [BR:
ecra04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117942941 (usp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
Ubiquitin_3
DUSP
UCH_1
USP7_C2
USP7_ICP0_bdg
Choline_bind_1
Motif
Other DBs
NCBI-GeneID:
117942941
NCBI-ProteinID:
XP_034724653
LinkDB
All DBs
Position
4:complement(12872775..12884824)
Genome browser
AA seq
1011 aa
AA seq
DB search
MMAEGGGPEPGGAADSDSEPVAAEMPTPSTENQKQTIGSLLKTTLRKGDEWYLIDSRWFK
QWKKYVGFDSWDMYNVGERSLYPGPIDNSGLFSDQETQALKEHLIDELDYVLVPTEAWNK
ILNWYGCLEGQRPIVRKVVEHGMFVKHCKVEVYLLELNLCENDNMDNVVTRHFSKADTID
TIEKEMRTLFNIPSEKETRLWNKYMSNTYEQLNKPDSTVQDAGLFQGQVLVIELKNEDGT
WPRQASHPKTSTTPSRNFTTSPKLSSNSTASISSTVTNGDSSCSPGYTLNNSTSSGNRLG
GYNSYSSSYNYRESQSQPGLCGLSNLGNTCFMNSALQCLSNASPLTEYFLNDQYEAEINR
ENPLGMRGEIAEAYADLVKQMWLSRSSYVAPRTFKTQVGRFAPQFSGYQQQDSQELLAFL
LDGLHEDLNRVKKKPYLALRDAEGRPDEIVAKEAWTNHRLRNDSIIVDIFHGLFKSTLVC
PECSKVSVTFDPFCYLTLPLPMKKDRTMEVFLVRSDPESRPTQYRVVVPKLGTVTDLCSA
LSKLCGFPPENMVVADVYNHRFHKIYRRDDGLNQIMEKDDIFVYEVQEEDSERMNLPVYF
RERHSKHVGSSTSTMLFGQPLLLTVPRHNLIADVLYDKILEKIGRYVKQSQSPHNESRAS
ASASATVASCSQAPECSTASSLSASLGGCGSPLSDGASCSASFSNGNNHSGTCSKTNGLY
DGEEEAMDHQVSPERENGQSEEEEEETSDLENGSKGDMPKQSSPAKLFTFSIVNSYGTAN
ISPLPCDGNVLKLNPHSTVAIDWDTESKKLCYDEQEAEAYEKHESMLQPQRKKATVALRE
CIELFTTMETLGEHDPWYCPTCKKHQQATKKFDLWSLPRVLVVHLKRFSYNRCWRDKLDT
VVDFPIRDLNMSEFVCDPKAGPYVYDLVAVSNHYGGMGGGHYTAYGKNKVDGKWYYFDDS
SVSSASEDQIVTKAAYVLFYQRREEEAPSKPQPSASLGGAPEAVDDHMDTN
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgatggccgaaggaggcggacccgagccgggtggcgcggcagactccgactccgagccg
gtagccgcagaaatgccaaccccttcaaccgaaaatcaaaaacagactattgggtcacta
ttgaaaacaactctaagaaagggcgacgaatggtatctaatagacagccggtggttcaaa
caatggaagaaatatgtcggatttgacagctgggacatgtacaatgttggagaacgtagc
ctctatccaggaccaattgataactccgggttgttctcagaccaggagactcaagccttg
aaagagcaccttatagatgagctggactatgtccttgtacccactgaggcatggaataaa
attttgaactggtacggctgccttgagggccaaagacccatcgtcaggaaggttgttgag
catggcatgtttgtcaagcactgtaaggtggaggtttatttgctggagctgaacttgtgt
gagaatgacaacatggacaatgttgtcacgcgtcatttcagtaaagccgatactatagat
actatagagaaggagatgaggacgctgttcaatatcccatcagagaaggagacacgcctc
tggaacaaatacatgagcaacacctacgagcagctgaacaagccagacagcaccgtacag
gatgctggtctcttccagggccaggtgcttgttattgaactgaagaatgaggatggcacg
tggcccagacaagcttcccatcccaaaaccagtacaaccccatccaggaatttcactacc
tccccaaaactctcctccaactcaacagccagtatctcttcaacagtaactaatggagac
agcagctgtagccctggctacacacttaacaacagcacctcctctggcaacagattggga
ggctacaattcatacagctcctcctacaactacagagagtcccagtcacagcctggcctg
tgtggtctcagtaatttgggcaacacatgctttatgaattctgccctccagtgcctgagc
aatgcatctccactcacagagtacttcctaaatgaccagtacgaggcagaaatcaaccga
gagaatcccctgggaatgaggggggagattgcagaggcctatgcagatctagtaaagcag
atgtggctgagccggagcagctatgtggccccacgtactttcaagacccaggttggacgt
tttgccccccagttttcgggctaccagcagcaggactctcaggagctgttggccttcctg
cttgacgggctccatgaagatctgaaccgcgtcaaaaagaagccttatctggccctgagg
gatgcagagggccgtccagacgagattgtagcaaaggaagcctggacgaaccaccgcctg
cgcaatgactcgattatagttgatattttccacggcctcttcaaatccactttggtgtgc
ccagagtgctccaaggtgtccgtaacctttgacccattctgctacctcacactgcctctc
cccatgaagaaggaccgtacgatggaggtcttcctggtgcgatcagaccctgagtcgaga
cccacacagtatcgagttgtggtcccaaaactgggtacagtgacagacctgtgcagcgcc
ttgtccaaactctgtggattccctccagaaaatatggtcgtggctgacgtttacaatcat
aggttccataaaatctacagacgtgatgatggcctcaaccaaataatggaaaaagatgac
atcttcgtatatgaggtacaggaggaggacagtgagaggatgaacctacctgtgtatttc
agggagcgccactccaagcatgtgggaagttccacaagcaccatgctgtttggccagcct
ttactcctcaccgtgcccagacacaacctcatagcagacgttctttacgacaagatccta
gagaagattgggcgctatgtaaaacaatcccagagcccccataatgaaagcagagcctca
gcctcggcgtcagcgaccgtcgccagctgcagccaagctcctgaatgttccacagcgtct
agtctcagtgccagcctgggtggctgtggcagtcccctgtcagacggggcctcgtgcagt
gccagcttcagtaatggcaacaaccactcagggacgtgcagcaaaactaatgggctttat
gatggtgaggaggaagccatggaccaccaggtgagccccgagcgagagaatggccagtct
gaagaggaggaagaggagacctctgaccttgagaatggatctaaaggagacatgcccaag
cagtcttcgccagccaagctcttcactttcagcatagtcaactcttacggaacagctaac
atcagcccgctgccctgtgatggaaatgtcctcaaactcaatccgcattcaacggtggcg
attgactgggacactgaatcaaagaaactgtgttatgatgaacaggaagcagaggcctat
gagaagcatgagagtatgctccagccccaaaggaagaaagccactgtggctctgagggaa
tgcatcgagctcttcaccaccatggagacactcggagaacacgatccatggtattgtcca
acatgtaagaaacaccaacaagccacaaaaaagtttgacctgtggtctctgcctcgcgtt
ctggtagttcatctaaagcgattttcctacaaccggtgttggagggacaagctggacacg
gtggtggactttcccatcagggatctgaacatgtccgagtttgtgtgtgaccccaaggcc
ggcccctacgtatatgaccttgttgctgtgtcaaaccactatggaggaatgggagggggt
cactacacagcttatggcaagaataaagtggacggaaagtggtattactttgatgacagc
agtgtctcctctgcctcagaggaccagattgtgactaaagcagcctatgtgctgttctat
cagcgcagagaggaagaagccccctccaaacctcagccttcggcgtcgttgggaggagcc
ccggaagcagtcgatgaccacatggacacaaactga
DBGET
integrated database retrieval system
