Etheostoma cragini (Arkansas darter): 117948346
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Entry
117948346 CDS
T07493
Symbol
calcoco1a
Name
(RefSeq) calcium-binding and coiled-coil domain-containing protein 1
KO
K25828
calcium-binding and coiled-coil domain-containing protein 1
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecra03021
]
117948346 (calcoco1a)
Transcription machinery [BR:
ecra03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
Others
117948346 (calcoco1a)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CALCOCO1
SKICH
DUF4570
WD40_alt
Motif
Other DBs
NCBI-GeneID:
117948346
NCBI-ProteinID:
XP_034733834
LinkDB
All DBs
Position
7:14502276..14511978
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AA seq
652 aa
AA seq
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MEKPWRVEFRNVGCSYFPQSRVDCHYTLSSQHNWASNDWIGLFKVGWLSVKDYHTFVWAL
APADNQEGTDVNCCVHFQASYLPKPSSQEYEFVYINAKGEVFSRSSKFTFCAPKPLEDLV
TLEEEPHGEEGGTDMLLVVPRAELLQSRLQECLRERAELLQAQEAANKQREKEKEEYKRA
REAWDRRRKGLESDIANLQEELKQSREKVNEMEMEQKEKQAFGESLAQQKRDLLDSREAS
KVRIKELEEDVKTLTQTTLERETELERMKERAKRAGAQRKEDECERKSLQTKLEQTEGEL
RSLCKEFQVLRNSLAQRDTSVLQLQNSITTLTQKLTTAHRKEAENEATLKEMRSLRERLN
ASERAAEGLKSDLSAMVVQRDHGQSELHQARLQAAQLTLQLADSSLAQREGRARWAQERQ
NLQRSAEKDHERLEKLNTEMQRMEERLQEERMERVKLEVELGREKDCNRVQLSETRRELQ
ELKASLRVAQKEKEQILAEKRELMEYFCQLEQKLGTVASAKWSAAPFASTGRPGSTLSDS
EDENPEALQPLRPPRSLGHYSLCEPGQLDSLLLATSPSSPREVERSAVVINQPAPLSLPH
QANADTLAHSSDSEEESDILQCARPSSGEETALLLPEQADTVLSDLADTSLW
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaccctggcgggtggagttcagaaatgtgggctgcagttacttccctcagagc
agagtcgattgccactacacactgagctcacagcacaactgggccagcaatgactggata
gggctctttaaggtgggatggttatcagtgaaggactaccacacgtttgtttgggcactt
gccccggccgacaatcaagagggcacagatgtcaactgctgtgtgcacttccaggcctcc
tacctacccaagcccagctcccaagagtatgagtttgtatacatcaatgctaagggggaa
gtgttctcccgcagctccaaattcactttctgcgctccaaagccacttgaggatctggtg
acccttgaggaggagccccatggagaggaaggaggcacagacatgttactggtagtgcca
agggctgaactgctgcagagtcgactgcaggaatgtctgcgagagcgtgcagagttgctc
caggcgcaggaggcggcgaacaagcagagggagaaagagaaggaggagtacaagagggcg
agggaggcctgggacagacgacgcaaagggttagaaagtgatatcgccaacctgcaggaa
gagctaaagcagagtcgggagaaggtcaacgagatggagatggagcagaaggagaaacag
gcttttggagaatcactagcccaacagaaacgtgatttattggattcaagggaggcgagc
aaagtgcgaatcaaagagctggaggaggatgtcaaaaccctgactcagacaactttagaa
agagagacagagttggaaaggatgaaggagagagcaaagagagcaggagctcagagaaaa
gaagatgagtgtgagagaaagagcctgcagaccaagctggaacagacagaaggtgaactc
cgaagtctgtgtaaggagttccaagtcctgaggaattcgctggcccagagagacacaagt
gtcctgcagcttcaaaacagcatcaccaccctcacccagaaactcaccactgcccacagg
aaagaggcggagaacgaggccacactgaaggagatgcgaagcctgcgggagcgtctgaac
gcgagtgagcgtgccgcagagggcttgaagagtgatctaagtgccatggtggtccagagg
gatcacgggcagagcgaattgcatcaggctcgtctgcaggctgcccagctcacccttcag
cttgcagattccagtctggcccagagagagggaagagcccgctgggcccaggagagacag
aatctgcagcgcagtgctgagaaggaccacgagcgtctagagaaactcaacacagagatg
cagaggatggaggagaggctgcaagaggagaggatggagagagtgaagctggaggtcgag
cttgggagagaaaaggattgcaaccgggttcagctgagtgaaacccgcagggagctccag
gagttgaaggccagcctgagggttgcccaaaaagagaaggagcagatacttgcagagaaa
cgggagttaatggaatacttctgtcagctggagcagaagctgggaacagtggccagtgcc
aagtggagcgctgccccgtttgcctctacagggcggcctggcagcacattatctgactct
gaggacgagaacccagaggctttgcagcccctccgtcccccaagatctctgggacactac
agcctgtgtgagccgggccagctggactctttgctcctcgccacctctccttcctccccc
agggaagtggagaggagcgcggtagtcatcaaccaaccagccccactctcattgccacac
caggccaacgctgacactctggcgcacagctctgattcggaggaggaatctgatatactt
cagtgtgcaagacccagctctggagaggaaacagcacttttgcttcctgagcaggctgac
actgttctcagtgatctggctgacacctcgctatggtaa
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